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L1_008_000M1_scaffold_2217

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2217_1
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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411..2744
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CR43_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM90622.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
hypothetical protein
L1_008_000M1_scaffold_2217_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2719..4185)
DNA (1467bp) protein (489aa)
putative two-component histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Putative two-component histidine kinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KW54_OSCVS
L1_008_000M1_scaffold_2217_3
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4182..4871)
DNA (690bp) protein (230aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F7R2_DESDL
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGA69045.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_008_000M1_scaffold_2217_4
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5028..5828
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNR4_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR47832.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L1_008_000M1_scaffold_2217_5
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5913..6446
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MNS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW24274.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
hypothetical protein
L1_008_000M1_scaffold_2217_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6595..7683
DNA (1089bp) protein (363aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase PfkB family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHW3_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDE51205.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_2217_7
unknown

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7699..7806
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_000M1_scaffold_2217_8
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7818..8972
DNA (1155bp) protein (385aa)
oxidoreductase n=1 Tax=Paenibacillus massiliensis RepID=UPI00036E0C01
oxidoreductase
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT04459.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L1_008_000M1_scaffold_2217_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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9053..9532
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
YbaK/EbsC protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJK9_9FIRM
hypothetical protein
L1_008_000M1_scaffold_2217_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9631..11277
DNA (1647bp) protein (549aa)
alsS2; acetolactate synthase AlsS (EC:2.2.1.6)
Acetolactate synthase AlsS {ECO:0000313|EMBL:AGF57507.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AGF57507.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Acetolactate synthase AlsS n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N1Z0_9CLOT
L1_008_000M1_scaffold_2217_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11433..12356)
DNA (924bp) protein (308aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE2_9FIRM
Indigoidine synthase A family protein
L1_008_000M1_scaffold_2217_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12353..13276)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66962.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ribokinase-like domain-containing protein
L1_008_000M1_scaffold_2217_13
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13763..14914
DNA (1152bp) protein (384aa)
Autotransporter n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H5C7_PSESX
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AKF53225.1}; TaxID=1324932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae HS191.;"
autotransporter
L1_008_000M1_scaffold_2217_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14974..15417)
DNA (444bp) protein (148aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BRQ0_9FIRM
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:ETD17166.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
Displaying 14 items

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