ggKbase home page

L1_008_000M1_scaffold_3123

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3123_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

3..245
DNA (243bp) protein (81aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEB9_9FIRM
DegV family protein {ECO:0000313|EMBL:CCY23071.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
degV family protein
L1_008_000M1_scaffold_3123_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(344..715)
DNA (372bp) protein (124aa)
Transcriptional regulator ArsR family n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE03_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CCY23072.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ArsR family transcriptional regulator
L1_008_000M1_scaffold_3123_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(733..2703)
DNA (1971bp) protein (657aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23073.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_3123_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(2681..2932)
DNA (252bp) protein (84aa)
Heavy-metal-associated domain n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4W1_9FIRM
Heavy-metal-associated domain {ECO:0000313|EMBL:CCY23074.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Heavy-metal-associated domain.
L1_008_000M1_scaffold_3123_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(3044..3613)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23075.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
putative hydrolase
L1_008_000M1_scaffold_3123_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(3895..4182)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23076.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
pbpB; penicillin-binding protein 2
L1_008_000M1_scaffold_3123_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

4674..5441
DNA (768bp) protein (256aa)
Copper homeostasis protein CutC n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE06_9FIRM
Copper homeostasis protein CutC {ECO:0000313|EMBL:CCY23077.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Uncharacterized protein involved in copper resistance
L1_008_000M1_scaffold_3123_8
unknown

Not on your lists

comp(5315..5626)
DNA (312bp) protein (104aa)

This feature has no annotations

L1_008_000M1_scaffold_3123_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5568..6878)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23078.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Glycosidases
L1_008_000M1_scaffold_3123_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(6978..7835)
DNA (858bp) protein (286aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4W5_9FIRM
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCY23079.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycerophosphoryl diester phosphodiesterase
L1_008_000M1_scaffold_3123_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(7858..8718)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23080.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
peptide ABC transporter permease
L1_008_000M1_scaffold_3123_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(8754..9671)
DNA (918bp) protein (306aa)
PUTATIVE ABC TRANSPORTER PERMEASE PROTEIN OLIGOPEPTIDE n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEC9_9FIRM
PUTATIVE ABC TRANSPORTER PERMEASE PROTEIN OLIGOPEPTIDE {ECO:0000313|EMBL:CCY23081.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
oligopeptide ABC transporter permease
L1_008_000M1_scaffold_3123_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(9668..10645)
DNA (978bp) protein (326aa)
ABC-type oligopeptide transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE10_9FIRM
ABC-type oligopeptide transport system ATPase component {ECO:0000313|EMBL:CCY23082.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
peptide ABC transporter substrate-binding protein
L1_008_000M1_scaffold_3123_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(10642..11481)
DNA (840bp) protein (280aa)
Oligopeptide ABC transporter (ATP-binding protein) n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0U1_9FIRM
Oligopeptide ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CCY23083.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_3123_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(11610..12017)
DNA (408bp) protein (136aa)
Oligopeptide ABC transpoter oligopeptide-binding protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4W9_9FIRM
Oligopeptide ABC transpoter oligopeptide-binding protein {ECO:0000313|EMBL:CCY23084.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_3123_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(11996..13339)
DNA (1344bp) protein (448aa)
Oligopeptide ABC transpoter oligopeptide-binding protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4W9_9FIRM
Oligopeptide ABC transpoter oligopeptide-binding protein {ECO:0000313|EMBL:CCY23084.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
oligopeptide ABC transporter substrate-binding protein
L1_008_000M1_scaffold_3123_17
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(13584..14039)
DNA (456bp) protein (152aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0C7_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CCY23085.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_3123_18
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(14061..15686)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HED2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23086.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L1_008_000M1_scaffold_3123_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15757..16320)
DNA (564bp) protein (188aa)
Methyltransferase, MtaA/CmuA family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AWK2_9CLOT
Methyltransferase, MtaA/CmuA family {ECO:0000313|EMBL:ERI70199.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
uroporphyrinogen-III decarboxylase
Displaying 19 items

View Taxonomy