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L1_008_000M1_scaffold_3153

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3153_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(98..1435)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M732_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66839.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_008_000M1_scaffold_3153_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1444..2778)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66838.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Predicted membrane protein involved in D-alanine export
L1_008_000M1_scaffold_3153_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2788..3702)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22585.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_3153_4
unknown

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comp(3741..4244)
DNA (504bp) protein (168aa)

This feature has no annotations

L1_008_000M1_scaffold_3153_5
unknown

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comp(4305..4460)
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000M1_scaffold_3153_6
unknown

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comp(4494..5729)
DNA (1236bp) protein (412aa)

This feature has no annotations

L1_008_000M1_scaffold_3153_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5743..6024)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBL1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02224.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_3153_8
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6160..7353)
DNA (1194bp) protein (398aa)
D-alanyl-lipoteichoic acid biosynthesis protein DltD n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M0E5_9FIRM
D-alanyl-lipoteichoic acid biosynthesis protein DltD {ECO:0000313|EMBL:EOS64480.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
DltD domain-containing protein
L1_008_000M1_scaffold_3153_9
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7359..7577)
DNA (219bp) protein (73aa)
D-alanine--poly(phosphoribitol) ligase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00565}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00565};; D-alanyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00565}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
D-alanine--poly(phosphoribitol) ligase subunit 2 n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A3U4_DESDJ
hypothetical protein
L1_008_000M1_scaffold_3153_10
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7590..8726)
DNA (1137bp) protein (379aa)
alanyl transferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289E3CC
MBOAT family protein {ECO:0000313|EMBL:EDU39426.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
hypothetical protein
L1_008_000M1_scaffold_3153_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8736..10256)
DNA (1521bp) protein (507aa)
dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00593}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00593};; D-alanine-D-alanyl carrier protein ligase {ECO:0000256|HAMAP-Rule:MF_00593}; D-alanine-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00593}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
D-alanine--poly(Phosphoribitol) ligase subunit 1 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWU9_CLOSA
L1_008_000M1_scaffold_3153_12
unknown

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comp(10243..10806)
DNA (564bp) protein (188aa)

This feature has no annotations

L1_008_000M1_scaffold_3153_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10816..11328)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B620_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49639.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_3153_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11325..11774)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7Y4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22582.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_3153_15
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11800..13290)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZFW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ14761.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L1_008_000M1_scaffold_3153_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(13691..14386)
DNA (696bp) protein (232aa)
N-acetylmuramyl-L-alanine amidase negative regulator of AmpC AmpD n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J2B3_9FIRM
N-acetylmuramyl-L-alanine amidase negative regulator of AmpC AmpD {ECO:0000313|EMBL:CCY43027.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
N-acetylmuramoyl-L-alanine amidase
L1_008_000M1_scaffold_3153_17
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14383..14592)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0S2_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99100.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_3153_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(14611..14910)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LSD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86509.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_3153_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(15272..16201)
DNA (930bp) protein (310aa)
Elongation factor Ts n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LTW0_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
tsf; elongation factor Ts
Displaying 19 items

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