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L1_008_000M1_scaffold_1160

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1160_1
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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1..147
DNA (147bp) protein (49aa)
30S ribosomal protein S10 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITB7_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ribosomal protein S10
L1_008_000M1_scaffold_1160_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


278..1009
DNA (732bp) protein (244aa)
50S ribosomal protein L3 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID32_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplC; 50S ribosomal protein L3
L1_008_000M1_scaffold_1160_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


1026..1646
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID15_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplD; 50S ribosomal protein L4
L1_008_000M1_scaffold_1160_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


1646..1939
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT40_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplW; 50S ribosomal protein L23
L1_008_000M1_scaffold_1160_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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2015..2806
DNA (792bp) protein (264aa)
50S ribosomal protein L2 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZI0_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
rplB; 50S ribosomal protein L2
L1_008_000M1_scaffold_1160_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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2819..3094
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNW9_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
30S ribosomal protein S19
L1_008_000M1_scaffold_1160_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


3115..3450
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5II46_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplV; 50S ribosomal protein L22
L1_008_000M1_scaffold_1160_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


3464..4255
DNA (792bp) protein (264aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID08_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsC; 30S ribosomal protein S3
L1_008_000M1_scaffold_1160_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


4255..4689
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT34_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplP; 50S ribosomal protein L16
L1_008_000M1_scaffold_1160_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


4676..4882
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZH5_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1160_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


4898..5161
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNW4_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
30S ribosomal protein S17
L1_008_000M1_scaffold_1160_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


5176..5544
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID03_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplN; 50S ribosomal protein L14
L1_008_000M1_scaffold_1160_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


5560..5865
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJB6_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
rplX; 50S ribosomal protein L24
L1_008_000M1_scaffold_1160_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


5882..6421
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MP06_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Ribosomal protein L5
L1_008_000M1_scaffold_1160_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


6438..6623
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID16_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsZ; 30S ribosomal protein S14, type Z
L1_008_000M1_scaffold_1160_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


6967..7365
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICZ6_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsH; 30S ribosomal protein S8
L1_008_000M1_scaffold_1160_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


7381..7926
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT20_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplF; 50S ribosomal protein L6
L1_008_000M1_scaffold_1160_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


7944..8303
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJB3_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
50S ribosomal protein L18
L1_008_000M1_scaffold_1160_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


8321..8839
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID10_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsE; 30S ribosomal protein S5
L1_008_000M1_scaffold_1160_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


8853..9035
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5II29_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpmD; 50S ribosomal protein L30
L1_008_000M1_scaffold_1160_21
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


9049..9489
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICZ1_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rplO; 50S ribosomal protein L15
L1_008_000M1_scaffold_1160_22
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


9490..10776
DNA (1287bp) protein (429aa)
Protein translocase subunit SecY n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT15_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
secY; preprotein translocase SecY subunit
L1_008_000M1_scaffold_1160_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

10792..11424
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT87_9FIRM
L1_008_000M1_scaffold_1160_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

11427..12182
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID04_9FIRM
L1_008_000M1_scaffold_1160_25
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

12187..12474
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87506.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1160_26
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

12475..12699
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=2 Tax=environmental samples RepID=R5IT09_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1160_27
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

12729..12842
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=environmental samples RepID=R5ELT1_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
50S ribosomal protein L36
L1_008_000M1_scaffold_1160_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


12863..13231
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICZ9_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
30S ribosomal protein S13
L1_008_000M1_scaffold_1160_29
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


13249..13647
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5II18_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsK; 30S ribosomal protein S11
L1_008_000M1_scaffold_1160_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


13669..14265
DNA (597bp) protein (199aa)
30S ribosomal protein S4 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICX9_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SSU ribosomal protein S4P
Displaying items 1-30 of 46 in total

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