ggKbase home page

L1_008_000M1_scaffold_1276

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1276_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..144
DNA (144bp) protein (48aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUR7_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_008_000M1_scaffold_1276_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

219..482
DNA (264bp) protein (88aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVP5_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_008_000M1_scaffold_1276_3
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

519..1022
DNA (504bp) protein (168aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNC0_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1276_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1019..1561
DNA (543bp) protein (181aa)
ATP synthase F1 subcomplex delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY41_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_008_000M1_scaffold_1276_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

1595..3109
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNL3_9FIRM
L1_008_000M1_scaffold_1276_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

3128..3973
DNA (846bp) protein (282aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIQ6_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L1_008_000M1_scaffold_1276_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

3988..5382
DNA (1395bp) protein (465aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LUR3_9FIRM
L1_008_000M1_scaffold_1276_8
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

5379..5780
DNA (402bp) protein (134aa)
atpC1; ATP synthase F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNC5_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1276_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(6176..7423)
DNA (1248bp) protein (416aa)
Putative protease n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MM25_9FIRM
Putative protease {ECO:0000313|EMBL:CDB86852.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1276_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(7474..8340)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86853.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1276_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists


comp(8364..10598)
DNA (2235bp) protein (745aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LT57_9FIRM
DNA gyrase subunit A {ECO:0000313|EMBL:CDB86854.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1276_12
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(10623..12605)
DNA (1983bp) protein (661aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase B subunit C-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLT7_9FIRM
DNA gyrase B subunit C-terminal domain protein {ECO:0000313|EMBL:CDB86855.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1276_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

12884..14368
DNA (1485bp) protein (495aa)
UPF0371 protein CLOLEP_02469 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGF2_9FIRM
UPF0371 protein CLOLEP_02469 {ECO:0000313|EMBL:CCY41208.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1276_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

14406..15755
DNA (1350bp) protein (450aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.52)
Beta-glucosidase-related glycosidases n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH86_9FIRM
L1_008_000M1_scaffold_1276_15
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

15788..15982
DNA (195bp) protein (65aa)
PspC domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LT62_9FIRM
PspC domain protein {ECO:0000313|EMBL:CDB86859.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
stress-responsive transcriptional regulator
L1_008_000M1_scaffold_1276_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(16443..18056)
DNA (1614bp) protein (538aa)
ppaC; manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Manganese-dependent inorganic pyrophosphatase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEC9_9FIRM
Manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:CCY40448.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1276_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(18060..18839)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40449.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1276_18
unknown

Not on your lists

comp(18988..19182)
DNA (195bp) protein (65aa)

This feature has no annotations

L1_008_000M1_scaffold_1276_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

19325..19897
DNA (573bp) protein (191aa)
Hdig domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNU3_9FIRM
Hdig domain protein {ECO:0000313|EMBL:CDB87462.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1276_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

20024..21130
DNA (1107bp) protein (369aa)
Metallo-beta-lactamase domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICZ3_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCY39940.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1276_21
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(21127..21795)
DNA (669bp) protein (223aa)
Lipolytic protein G-D-S-L family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILU3_9FIRM
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CCY43093.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1276_22
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

22031..22456
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40518.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1276_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

22477..22929
DNA (453bp) protein (151aa)
PF04657 family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUQ6_9FIRM
PF04657 family protein {ECO:0000313|EMBL:CCY40517.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1276_24
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(22981..23853)
DNA (873bp) protein (291aa)
EDD domain protein DegV family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LGE8_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDB86553.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1276_25
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

24067..25263
DNA (1197bp) protein (399aa)
dacA1; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacA1 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IW95_9FIRM
D-alanyl-D-alanine carboxypeptidase DacA1 {ECO:0000313|EMBL:CCY40991.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1276_26
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

25290..25745
DNA (456bp) protein (152aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IL15_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CCY40989.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Displaying 26 items

View Taxonomy