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L1_008_000M1_scaffold_1502

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1502_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1..84
DNA (84bp) protein (28aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43661.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1502_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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287..3859
DNA (3573bp) protein (1191aa)
Chromosome partition protein Smc n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INC5_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
smc; chromosome segregation protein SMC
L1_008_000M1_scaffold_1502_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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3878..4768
DNA (891bp) protein (297aa)
Signal recognition particle receptor FtsY n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INK4_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
signal recognition particle-docking protein FtsY
L1_008_000M1_scaffold_1502_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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4780..5379
DNA (600bp) protein (200aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J425_9FIRM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
L1_008_000M1_scaffold_1502_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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5369..5827
DNA (459bp) protein (153aa)
Putative RNA-binding protein YhbY family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INC9_9FIRM
Putative RNA-binding protein YhbY family {ECO:0000313|EMBL:CCY43668.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1502_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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5833..7041
DNA (1209bp) protein (403aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITL0_9FIRM
L1_008_000M1_scaffold_1502_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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7031..8386
DNA (1356bp) protein (452aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INK8_9FIRM
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CCY43670.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
cell envelope-related function transcriptional attenuator common domain protein
L1_008_000M1_scaffold_1502_8
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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8405..8770
DNA (366bp) protein (122aa)
Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0U4_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1502_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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9075..11579
DNA (2505bp) protein (835aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J431_9FIRM
L1_008_000M1_scaffold_1502_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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11860..12042
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=2 Tax=environmental samples RepID=R5IND4_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsU; 30S ribosomal protein S21
L1_008_000M1_scaffold_1502_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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12228..12737
DNA (510bp) protein (170aa)
HAD phosphatase family IIIA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M077_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CDB87831.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
HAD superfamily phosphatase
L1_008_000M1_scaffold_1502_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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12724..13791
DNA (1068bp) protein (356aa)
proline aminopeptidase (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41165.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1502_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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13883..14452
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LK38_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
efp; elongation factor P
L1_008_000M1_scaffold_1502_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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14478..14936
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LVY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87834.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1502_15
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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15019..15267
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LI37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87123.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Protein of unknown function (DUF1653).
L1_008_000M1_scaffold_1502_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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15349..16041
DNA (693bp) protein (231aa)
dnaQ; putative DNA polymerase III epsilon subunit (EC:2.7.7.7)
Putative DNA polymerase III epsilon subunit n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LPB8_9FIRM
Putative DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CDB87720.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1502_17
unknown

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16056..16238
DNA (183bp) protein (61aa)

This feature has no annotations

L1_008_000M1_scaffold_1502_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(16277..16957)
DNA (681bp) protein (227aa)
HAD-superfamily hydrolase subfamily IA variant 1 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MPV5_9FIRM
HAD-superfamily hydrolase subfamily IA variant 1 {ECO:0000313|EMBL:CDB87842.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
haloacid dehalogenase
L1_008_000M1_scaffold_1502_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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17093..19243
DNA (2151bp) protein (717aa)
Tex-like protein N-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IC78_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CCY39680.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Tex-like protein
L1_008_000M1_scaffold_1502_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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19273..20286
DNA (1014bp) protein (338aa)
L-asparaginase type I family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNN4_9FIRM
L-asparaginase type I family protein {ECO:0000313|EMBL:CCZ46527.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L-asparaginase type I family protein
L1_008_000M1_scaffold_1502_21
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(20570..21289)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43800.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1502_22
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(21347..22429)
DNA (1083bp) protein (361aa)
AMP-binding enzyme n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITZ5_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:CCY43799.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
AMP-dependent synthetase and ligase
Displaying 22 items

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