ggKbase home page

L1_008_000M1_scaffold_1516

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1516_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

429..1034
DNA (606bp) protein (202aa)
Putative lipoprotein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJV0_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CCY40569.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1516_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(1133..1564)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LT05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86804.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1516_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1719..3110
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3C7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49793.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1516_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(3195..4292)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46484.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L1_008_000M1_scaffold_1516_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(4305..5708)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46483.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Predicted membrane protein involved in D-alanine export
L1_008_000M1_scaffold_1516_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(5736..6500)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SJF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46851.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L1_008_000M1_scaffold_1516_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(6560..7948)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41185.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
proteinase inhibitor I4 serpin
L1_008_000M1_scaffold_1516_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7953..9200)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63587.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_008_000M1_scaffold_1516_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(9324..11120)
DNA (1797bp) protein (599aa)
peptidase M56 n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B40E31
Uncharacterized protein {ECO:0000313|EMBL:ESL14651.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
L1_008_000M1_scaffold_1516_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11122..11481)
DNA (360bp) protein (120aa)
Predicted transcriptional regulator n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIG9_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK93416.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_1516_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

11796..12800
DNA (1005bp) protein (335aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87487.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1516_12
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

12797..13630
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87486.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
prephenate dehydrogenase
L1_008_000M1_scaffold_1516_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

13627..14685
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNM4_9FIRM
L1_008_000M1_scaffold_1516_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

14682..15944
DNA (1263bp) protein (421aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMP0_9FIRM
L1_008_000M1_scaffold_1516_15
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

15941..17014
DNA (1074bp) protein (358aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Chorismate synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJ41_9FIRM
chorismate synthase
L1_008_000M1_scaffold_1516_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

17021..18163
DNA (1143bp) protein (381aa)
Chorismate mutase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVQ4_9FIRM
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:CCX47430.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_1516_17
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

18165..19385
DNA (1221bp) protein (407aa)
aroE_aroK; shikimate dehydrogenase/shikimate kinase (EC:1.1.1.25 2.7.1.71)
Shikimate kinase 2 n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS95_9FIRM
Shikimate kinase 2 {ECO:0000313|EMBL:CCX70810.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L1_008_000M1_scaffold_1516_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

19382..19819
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
3-dehydroquinate dehydratase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J358_9FIRM
dehydroquinase class II
L1_008_000M1_scaffold_1516_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

19950..21548
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40819.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Displaying 19 items

View Taxonomy