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L1_008_000M1_scaffold_1757

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1757_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..2967)
DNA (2967bp) protein (989aa)
Peptidase, M56 family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT96_9FIRM
Peptidase, M56 family {ECO:0000313|EMBL:EDN00659.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
peptidase M56 family protein
L1_008_000M1_scaffold_1757_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(2964..3335)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41988.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1757_3
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3384..5507)
DNA (2124bp) protein (708aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JCX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32084.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L1_008_000M1_scaffold_1757_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5626..6189)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SJ14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46721.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
HD domain-containing protein
L1_008_000M1_scaffold_1757_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(6209..7570)
DNA (1362bp) protein (454aa)
DNA repair protein radA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LP43_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
radA; DNA repair protein RadA
L1_008_000M1_scaffold_1757_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(7567..8277)
DNA (711bp) protein (237aa)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LVE1_9FIRM
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:CDB87624.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
cell wall hydrolase/autolysin
L1_008_000M1_scaffold_1757_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(8391..9614)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWD3_9FIRM
tyrosyl-tRNA synthetase
L1_008_000M1_scaffold_1757_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(9997..11679)
DNA (1683bp) protein (561aa)
DNA repair protein RecN n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX27_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
recN; DNA repair protein RecN
L1_008_000M1_scaffold_1757_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(11703..12173)
DNA (471bp) protein (157aa)
Arginine repressor n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LHX3_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
argR; arginine repressor
L1_008_000M1_scaffold_1757_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(12178..13047)
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILZ4_9FIRM
L1_008_000M1_scaffold_1757_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(13053..13856)
DNA (804bp) protein (268aa)
Hemolysin TlyA family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGR4_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:CCY41333.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hemolysin A
L1_008_000M1_scaffold_1757_12
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(13846..15684)
DNA (1839bp) protein (613aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY52_9FIRM
L1_008_000M1_scaffold_1757_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(15712..16302)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41325.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1757_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17154..18020)
DNA (867bp) protein (289aa)
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-)
Polyprenyl synthetase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX09_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CCY41322.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1757_15
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(18010..18246)
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
xseB; exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LTS8_9FIRM
L1_008_000M1_scaffold_1757_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(18221..19441)
DNA (1221bp) protein (407aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LMI2_9FIRM
Displaying 16 items

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