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L1_008_000M1_scaffold_1905

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1905_1
unknown

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comp(201..437)
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_000M1_scaffold_1905_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(862..1098)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CL43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23888.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1905_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

1403..1681
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZIB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14245.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
phage-type endonuclease
L1_008_000M1_scaffold_1905_4
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1811..2650
DNA (840bp) protein (280aa)
Antirestriction protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJI8_9FIRM
Antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:CBL19999.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1905_5
unknown

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2679..2780
DNA (102bp) protein (34aa)

This feature has no annotations

L1_008_000M1_scaffold_1905_6
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2936..3502
DNA (567bp) protein (189aa)
Site-specific recombinase phage integrase family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TVN9_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC73894.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
site-specific recombinase XerD
L1_008_000M1_scaffold_1905_7
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3527..4807)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKW2_TREBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE16559.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L1_008_000M1_scaffold_1905_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4804..5292)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67480.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L1_008_000M1_scaffold_1905_9
unknown

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comp(5388..5861)
DNA (474bp) protein (158aa)

This feature has no annotations

L1_008_000M1_scaffold_1905_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5918..6205
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34134.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_1905_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6224..7915
DNA (1692bp) protein (564aa)
Repeat protein n=2 Tax=Oscillibacter RepID=U2Q2N4_9FIRM
Repeat protein {ECO:0000313|EMBL:ERK56975.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
S-layer protein
L1_008_000M1_scaffold_1905_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(8064..9575)
DNA (1512bp) protein (504aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEU4_9FIRM
L1_008_000M1_scaffold_1905_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(9612..10085)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJV6_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
transcription elongation factor GreA
L1_008_000M1_scaffold_1905_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(10178..11368)
DNA (1191bp) protein (397aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase S41 family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKZ6_9FIRM
Peptidase S41 family {ECO:0000313|EMBL:CDB88118.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1905_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(11446..12732)
DNA (1287bp) protein (429aa)
Peptidase M23 family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICD0_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CCY39735.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative metalloendopeptidase
L1_008_000M1_scaffold_1905_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(12754..13656)
DNA (903bp) protein (301aa)
Cell division protein FtsX n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQM1_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ftsX; cell division protein FtsX
L1_008_000M1_scaffold_1905_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(13628..14317)
DNA (690bp) protein (230aa)
Cell division ATP-binding protein FtsE n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICA9_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCY39733.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ftsE; cell division protein FtsE
L1_008_000M1_scaffold_1905_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(14351..15445)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39732.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1905_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(15571..16353)
DNA (783bp) protein (261aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICC7_9FIRM
ribosomal small subunit pseudouridine synthase A
L1_008_000M1_scaffold_1905_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

16428..16964
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39729.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1905_21
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

17239..17967
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IS98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39727.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
membrane protein-like protein
L1_008_000M1_scaffold_1905_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18278..19147
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26018.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative membrane spanning protein
L1_008_000M1_scaffold_1905_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

19104..19769
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J0G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42457.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
phosphatase
L1_008_000M1_scaffold_1905_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

19899..20585
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39764.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1905_25
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

20663..22504
DNA (1842bp) protein (614aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEJ1_9FIRM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ESL12830.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L1_008_000M1_scaffold_1905_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22565..24310)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62321.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Na/Pi-cotransporter II-like protein
L1_008_000M1_scaffold_1905_27
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24501..25631)
DNA (1131bp) protein (377aa)
aminoglycoside N(3'''')-acetyltransferase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B740AC
Aminoglycoside 3-N-acetyltransferase {ECO:0000313|EMBL:EUB17245.1}; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
aminoglycoside N3-acetyltransferase
Displaying 27 items

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