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L1_008_000M1_scaffold_1911

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1911_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1..120
DNA (120bp) protein (40aa)
50S ribosomal protein L31 n=2 Tax=environmental samples RepID=R5IHC9_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
50S ribosomal protein L31
L1_008_000M1_scaffold_1911_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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202..1461
DNA (1260bp) protein (420aa)
GTPase HflX n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LIK4_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hlfX; putative GTP-binding protein HflX
L1_008_000M1_scaffold_1911_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1465..2082
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IS80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39712.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1911_4
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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2152..3156
DNA (1005bp) protein (335aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LN57_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
L1_008_000M1_scaffold_1911_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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3187..4926
DNA (1740bp) protein (580aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LYV0_9FIRM
L1_008_000M1_scaffold_1911_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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4930..6105
DNA (1176bp) protein (392aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IC85_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
sigA; RNA polymerase sigma factor RpoD
L1_008_000M1_scaffold_1911_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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6216..6434
DNA (219bp) protein (73aa)
Acyl carrier protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IS75_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
acpP; acyl carrier protein AcpP
L1_008_000M1_scaffold_1911_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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7082..8752
DNA (1671bp) protein (557aa)
dnaX; DNA polymerase III gamma/tau subunit (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJ82_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCY40379.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1911_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

8766..9119
DNA (354bp) protein (118aa)
Nucleoid-associated protein BN515_01758 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MP56_9FIRM
Nucleoid-associated protein BN515_01758 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1911_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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9116..9715
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUA1_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
recR; recombination protein RecR
L1_008_000M1_scaffold_1911_11
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9759..10250)
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=N2A9F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23088.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
HD domain.
L1_008_000M1_scaffold_1911_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(10268..11905)
DNA (1638bp) protein (546aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IP01_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCY43903.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative ABC transporter substrate-binding protein
L1_008_000M1_scaffold_1911_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(11902..12705)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MP62_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1911_14
unknown

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comp(12714..13238)
DNA (525bp) protein (175aa)

This feature has no annotations

L1_008_000M1_scaffold_1911_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(13235..16054)
DNA (2820bp) protein (940aa)
Protein translocase subunit SecA n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4Q1_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
secA; preprotein translocase SecA subunit
L1_008_000M1_scaffold_1911_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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16196..17023
DNA (828bp) protein (276aa)
yidA; Phosphatase YidA (EC:3.1.3.-)
Cof-like hydrolase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUB7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCY43909.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1911_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

17025..17798
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4F7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43911.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1911_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

17817..18152
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40109.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
aspartate racemase
L1_008_000M1_scaffold_1911_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18112..18453
DNA (342bp) protein (114aa)
racD; putative aspartate racemase (EC:5.1.1.13)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LYZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87366.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1911_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18764..20008
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87367.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Na+/H+-dicarboxylate symporters
L1_008_000M1_scaffold_1911_21
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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20189..21466
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LIP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87368.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1911_22
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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21749..24307
DNA (2559bp) protein (853aa)
YacP-like NYN domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICR9_9FIRM
YacP-like NYN domain protein {ECO:0000313|EMBL:CCY39880.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
small GTP-binding protein domain
L1_008_000M1_scaffold_1911_23
unknown

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comp(24179..24580)
DNA (402bp) protein (134aa)

This feature has no annotations

L1_008_000M1_scaffold_1911_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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24820..25815
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40428.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L1_008_000M1_scaffold_1911_25
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

25812..26192
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40429.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1911_26
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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26196..26705
DNA (510bp) protein (170aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEE0_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:CCY40430.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1911_27
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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26799..28091
DNA (1293bp) protein (431aa)
Electron transport complex RnfABCDGE type C subunit n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUM3_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
RnfABCDGE type electron transport complex subunit C
L1_008_000M1_scaffold_1911_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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28088..28993
DNA (906bp) protein (302aa)
Electron transport complex rnfabcdge type D subunit n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEB2_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rnfD; Electron transport complex protein RnfD
L1_008_000M1_scaffold_1911_29
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

28990..29532
DNA (543bp) protein (181aa)
Electron transport complex RnfABCDGE type G subunit n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJD6_9FIRM
Electron transport complex RnfABCDGE type G subunit {ECO:0000313|EMBL:CCY40434.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
L1_008_000M1_scaffold_1911_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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29529..30206
DNA (678bp) protein (226aa)
Na(+)-translocating NADH-quinone reductase D subunit n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEE5_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
RnfABCDGE type electron transport complex subunit E
Displaying items 1-30 of 35 in total

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