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L1_008_000M1_scaffold_1955

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1955_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(429..818)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LYG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87181.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1955_2
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(919..1803)
DNA (885bp) protein (295aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D3V4_9FIRM
Transporter {ECO:0000313|EMBL:CCX71552.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
DMT superfamily permease
L1_008_000M1_scaffold_1955_3
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1921..3120)
DNA (1200bp) protein (400aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GXW0_9FIRM
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:CDB18902.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
iron-only hydrogenase maturation protein HydF
L1_008_000M1_scaffold_1955_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3144..4346)
DNA (1203bp) protein (401aa)
Periplasmic binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACC1_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EDQ96254.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ABC transporter substrate-binding protein
L1_008_000M1_scaffold_1955_5
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4415..5533)
DNA (1119bp) protein (373aa)
Oxidoreductase, nitrogenase component 1 family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPZ3_9CLOT
oxidoreductase/nitrogenase component 1
Oxidoreductase/nitrogenase component 1 {ECO:0000313|EMBL:AKA68049.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L1_008_000M1_scaffold_1955_6
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5530..6849)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET88733.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
L1_008_000M1_scaffold_1955_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6843..7607)
DNA (765bp) protein (255aa)
Nitrogenase subunit NifH (ATPase) (EC:1.18.6.1)
Putative nitrogenase iron protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJQ7_9FIRM
Putative nitrogenase iron protein {ECO:0000313|EMBL:CCY97526.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1955_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7604..8665)
DNA (1062bp) protein (354aa)
Radical SAM domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T178_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03908.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1955_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8658..9467)
DNA (810bp) protein (270aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5P3_9CLOT
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:CDA10085.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ABC transporter
L1_008_000M1_scaffold_1955_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9464..10465)
DNA (1002bp) protein (334aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACC6_9FIRM
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDQ96259.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ABC transporter permease
L1_008_000M1_scaffold_1955_11
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10618..10881)
DNA (264bp) protein (88aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Ruminococcus albus 8 RepID=E9SAG2_RUMAL
Iron-only hydrogenase system regulator {ECO:0000313|EMBL:EXM40659.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L1_008_000M1_scaffold_1955_12
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

11021..11251
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LPC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87730.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_1955_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(11352..12149)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LK88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87888.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative cell division protein
L1_008_000M1_scaffold_1955_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(12171..12689)
DNA (519bp) protein (173aa)
Cell division protein SepF n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IPA5_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
sepF; cell division protein SepF
L1_008_000M1_scaffold_1955_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(12721..13425)
DNA (705bp) protein (235aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUE0_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:CCY43929.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1955_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(13422..14636)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LPQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87885.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1955_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(14736..14969)
DNA (234bp) protein (78aa)
RNA-binding protein Hfq n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4H3_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hfq; Hfq protein
L1_008_000M1_scaffold_1955_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(15045..15977)
DNA (933bp) protein (311aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.8)
tRNA dimethylallyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUD5_9FIRM
L1_008_000M1_scaffold_1955_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(16013..17662)
DNA (1650bp) protein (550aa)
DNA mismatch repair protein MutL n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4R2_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
mutL; DNA mismatch repair protein MutL
Displaying 19 items

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