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L1_008_000M1_scaffold_1955_17

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(14736..14969)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4H3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 74.0
  • Bit_score: 116
  • Evalue 9.40e-24
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 74.0
  • Bit_score: 116
  • Evalue 1.30e-23
hfq; Hfq protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 74.0
  • Bit_score: 103
  • Evalue 1.80e-20

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Taxonomy

Firmicutes bacterium CAG:124 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 234
ATGCAACGTACCGAAACTTATCAGGATGTATTTCTCAATCAGGCGCGCAGAGAGCGCACGCCGCTGACCGTCTTTCTGGTCAACGGCTTTCAGATGCGCGGCGTGATTACGGGCTTTGATCCATTCGTCATTGTGCTGTTTTCCGAAGGCAGGCAGCAGATGATCTACAAACACGCGGTCTCGACCATCACGCCGTCGGTGCCGCTGCGCCTGAGCCAGGAGGAGTTGCAATAG
PROTEIN sequence
Length: 78
MQRTETYQDVFLNQARRERTPLTVFLVNGFQMRGVITGFDPFVIVLFSEGRQQMIYKHAVSTITPSVPLRLSQEELQ*