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L1_008_000M1_scaffold_2126

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2126_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
Glutamate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LYU0_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
glu/Leu/Phe/Val dehydrogenase
L1_008_000M1_scaffold_2126_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(243..1154)
DNA (912bp) protein (304aa)
Oxidoreductase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IZC4_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CCY42037.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
oxidoreductase
L1_008_000M1_scaffold_2126_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(1243..2331)
DNA (1089bp) protein (363aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIR7_9FIRM
L1_008_000M1_scaffold_2126_4
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(2508..2762)
DNA (255bp) protein (85aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LUJ8_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDB87314.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
sporulation transcriptional regulator SpoIIID
L1_008_000M1_scaffold_2126_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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2964..4187
DNA (1224bp) protein (408aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Arginine deiminase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZX4_9FIRM
hypothetical protein
L1_008_000M1_scaffold_2126_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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4223..5215
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Ornithine carbamoyltransferase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MPI0_9FIRM
ornithine carbamoyltransferase
L1_008_000M1_scaffold_2126_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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5241..6338
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87718.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_2126_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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6441..8126
DNA (1686bp) protein (562aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJ68_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:CCY42188.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_2126_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(8227..9642)
DNA (1416bp) protein (472aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Pyruvate kinase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKE2_9FIRM
pyruvate kinase
L1_008_000M1_scaffold_2126_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(10041..11336)
DNA (1296bp) protein (432aa)
Glycosidases (EC:3.2.1.1)
Glycosidases n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MPI4_9FIRM
Glycosidases {ECO:0000313|EMBL:CDB87722.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_2126_11
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11410..12735)
DNA (1326bp) protein (442aa)
MATE domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UUJ6_9FIRM
MATE domain protein {ECO:0000313|EMBL:ERL21895.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
multi antimicrobial extrusion protein MatE
L1_008_000M1_scaffold_2126_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12866..13507)
DNA (642bp) protein (214aa)
YitT family protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZ99_9CLOT
YitT family protein {ECO:0000313|EMBL:CDD54947.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L1_008_000M1_scaffold_2126_13
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13589..14443
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J4M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27227.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
transcriptional regulator, MerR family
L1_008_000M1_scaffold_2126_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

14473..15312
DNA (840bp) protein (280aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IRI8_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY42884.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
positive regulator for rhaBAD operon
L1_008_000M1_scaffold_2126_15
unknown

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comp(16054..16455)
DNA (402bp) protein (134aa)

This feature has no annotations

L1_008_000M1_scaffold_2126_16
unknown

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comp(16495..16863)
DNA (369bp) protein (123aa)

This feature has no annotations

L1_008_000M1_scaffold_2126_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

17161..18231
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IPE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42169.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
Displaying 17 items

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