ggKbase home page

L1_008_000M1_scaffold_2792

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2792_1
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

302..1735
DNA (1434bp) protein (478aa)
transposase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B704BA
Uncharacterized protein {ECO:0000313|EMBL:CDA53180.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
IS transposase
L1_008_000M1_scaffold_2792_2
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2773..3738)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V4Y0_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47809.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L1_008_000M1_scaffold_2792_3
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3744..3974)
DNA (231bp) protein (77aa)
Ribbon-helix-helix protein, CopG family n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T819_9FIRM
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:EGL36304.1}; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
CopG family transcriptional regulator
L1_008_000M1_scaffold_2792_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4011..7184)
DNA (3174bp) protein (1058aa)
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:CBL03157.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBL03157.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6E8_9FIRM
L1_008_000M1_scaffold_2792_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7204..9078)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WEP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07895.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
type I restriction-modification system specificity determinant
L1_008_000M1_scaffold_2792_6
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9118..9690)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Vibrio parahaemolyticus RepID=UPI00037697E5
Uncharacterized protein {ECO:0000313|EMBL:KGP77687.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
L1_008_000M1_scaffold_2792_7
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9752..11314)
DNA (1563bp) protein (521aa)
Type I restriction-modification system n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQJ0_9FIRM
type I restriction-modification system subunit M
Type I restriction-modification system {ECO:0000313|EMBL:EGG87844.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L1_008_000M1_scaffold_2792_8
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11452..11892)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK15731.1}; TaxID=1208320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans R6-15.;"
L1_008_000M1_scaffold_2792_9
unknown

Not on your lists

comp(11889..12356)
DNA (468bp) protein (156aa)

This feature has no annotations

L1_008_000M1_scaffold_2792_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12470..12715)
DNA (246bp) protein (82aa)
protein kinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C370AC
Uncharacterized protein {ECO:0000313|EMBL:CCZ46834.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
HipA-like C-terminal domain.
Displaying 10 items

View Taxonomy