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L1_008_000M1_scaffold_4260

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4260_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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139..1452
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86715.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_4260_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1887..2192)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM49945.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_008_000M1_scaffold_4260_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(2559..3956)
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IM27_9FIRM
L1_008_000M1_scaffold_4260_4
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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4128..5246
DNA (1119bp) protein (373aa)
tRNA adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LK92_9FIRM
tRNA adenylyltransferase {ECO:0000313|EMBL:CDB87893.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
tRNA nucleotidyltransferase
L1_008_000M1_scaffold_4260_5
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5236..5949)
DNA (714bp) protein (238aa)
Putative transporter n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0D3_9FIRM
Putative transporter {ECO:0000313|EMBL:CCY90702.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
putative transporter
L1_008_000M1_scaffold_4260_6

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comp(5907..6218)
DNA (312bp) protein (104aa)
Putative transporter n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0D3_9FIRM
K+-dependent Na+/Ca+ exchanger-like protein {ECO:0000313|EMBL:EKC63019.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative transporter
L1_008_000M1_scaffold_4260_7
unknown

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comp(6548..6736)
DNA (189bp) protein (63aa)

This feature has no annotations

L1_008_000M1_scaffold_4260_8
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6791..7432)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FC02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12013.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L1_008_000M1_scaffold_4260_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7642..9111
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KH31_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK99839.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L1_008_000M1_scaffold_4260_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9108..9770
DNA (663bp) protein (221aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47046.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_008_000M1_scaffold_4260_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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9868..11676
DNA (1809bp) protein (603aa)
ABC transporter ATP-binding/permease protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IN80_9FIRM
ABC transporter ATP-binding/permease protein {ECO:0000313|EMBL:CCY43510.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC transporter ATP-binding protein/permease
L1_008_000M1_scaffold_4260_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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11673..12836
DNA (1164bp) protein (388aa)
ABC transporter ATP-binding/permease protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IN08_9FIRM
ABC transporter ATP-binding/permease protein {ECO:0000313|EMBL:CCY43513.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC transporter ATP-binding protein/permease
L1_008_000M1_scaffold_4260_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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12833..13462
DNA (630bp) protein (210aa)
ABC transporter ATP-binding/permease protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IN08_9FIRM
ABC transporter ATP-binding/permease protein {ECO:0000313|EMBL:CCY43513.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
multidrug ABC transporter ATPase and permease
L1_008_000M1_scaffold_4260_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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13588..14736
DNA (1149bp) protein (383aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative two-component histidine kinase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNY2_9FIRM
L1_008_000M1_scaffold_4260_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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14705..15412
DNA (708bp) protein (236aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IV64_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY40601.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_4260_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(15522..16769)
DNA (1248bp) protein (416aa)
DAACS family dicarboxylate/amino acid:cation symporter n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKE7_9FIRM
DAACS family dicarboxylate/amino acid:cation symporter {ECO:0000313|EMBL:CDB87948.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Na+/H+-dicarboxylate symporters
L1_008_000M1_scaffold_4260_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(16973..17335)
DNA (363bp) protein (121aa)
aceF; dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41189.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_4260_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17445..18134)
DNA (690bp) protein (230aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4I3_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEU97165.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L1_008_000M1_scaffold_4260_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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18259..18546
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41125.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_4260_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(18585..19568)
DNA (984bp) protein (328aa)
S55 family peptidase (EC:3.4.21.-)
SpoIVB peptidase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4I1_9FIRM
SpoIVB peptidase {ECO:0000313|EMBL:CCY43827.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_4260_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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20243..20725
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B117_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46677.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Acetyltransferase (GNAT) family.
L1_008_000M1_scaffold_4260_22
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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21082..21339
DNA (258bp) protein (86aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
rpoB; DNA-directed RNA polymerase beta chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LR48_9FIRM
Displaying 22 items

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