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L1_008_000M1_scaffold_833

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_833_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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114..1868
DNA (1755bp) protein (585aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLL9_9FIRM
L1_008_000M1_scaffold_833_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1902..3185
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39874.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_833_3
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

3199..4026
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LR10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88360.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_833_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4239..5531
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT11_9FIRM
L1_008_000M1_scaffold_833_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(5581..6516)
DNA (936bp) protein (312aa)
Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I metallo peptidase MEROPS family M14C n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LPT0_9FIRM
Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I metallo peptidase MEROPS family M14C {ECO:0000313|EMBL:CDB87905.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
L1_008_000M1_scaffold_833_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(6554..7942)
DNA (1389bp) protein (463aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LI68_9FIRM
L1_008_000M1_scaffold_833_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(7939..8541)
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MN08_9FIRM
L1_008_000M1_scaffold_833_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(8543..9565)
DNA (1023bp) protein (341aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIP0_9FIRM
L1_008_000M1_scaffold_833_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(9588..10667)
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDJ6_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
bacterial peptide chain release factor 1 (bRF-1)
L1_008_000M1_scaffold_833_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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10798..11502
DNA (705bp) protein (235aa)
Polysaccharide deacetylase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITP5_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCY40177.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Cda1; xylanase/chitin deacetylase
L1_008_000M1_scaffold_833_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

11560..12105
DNA (546bp) protein (182aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITX3_9FIRM
L1_008_000M1_scaffold_833_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

12102..12695
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40175.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_833_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12718..13254
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97558.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_833_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(13301..14674)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IEJ1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCY40480.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
MATE efflux family protein
L1_008_000M1_scaffold_833_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

15021..15581
DNA (561bp) protein (187aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5APE8_9FIRM
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CCX45260.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative thiamine transporter
L1_008_000M1_scaffold_833_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(15662..16354)
DNA (693bp) protein (231aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
gidB; methyltransferase GidB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDQ3_9FIRM
L1_008_000M1_scaffold_833_17
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(16365..17219)
DNA (855bp) protein (285aa)
EDD domain protein DegV family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LGX6_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDB86758.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
EDD domain protein, DegV family
L1_008_000M1_scaffold_833_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17200..17697)
DNA (498bp) protein (166aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDU5_9FIRM
CMP/dCMP deaminase zinc-binding protein
L1_008_000M1_scaffold_833_19
unknown

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18040..18246
DNA (207bp) protein (69aa)

This feature has no annotations

L1_008_000M1_scaffold_833_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18243..18476
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MPG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87702.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_833_21
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18436..18699
DNA (264bp) protein (88aa)
Sigma-70 region 4 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZW3_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CDB87701.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_833_22
unknown

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comp(18935..19165)
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_000M1_scaffold_833_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

19327..21204
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IG47_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
L1_008_000M1_scaffold_833_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

21206..21985
DNA (780bp) protein (260aa)
Hydrolase TatD family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWG6_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CCY41031.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
deoxyribonuclease, TatD Mg-dependent
L1_008_000M1_scaffold_833_25
unknown

Not on your lists

22074..22280
DNA (207bp) protein (69aa)

This feature has no annotations

L1_008_000M1_scaffold_833_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(22267..23397)
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Sensory transduction histidine kinase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXG0_9FIRM
hypothetical protein
L1_008_000M1_scaffold_833_27
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(23575..24012)
DNA (438bp) protein (146aa)
Large-conductance mechanosensitive channel n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IT44_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
large conductance mechanosensitive channel protein
L1_008_000M1_scaffold_833_28
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(24177..25505)
DNA (1329bp) protein (443aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LGH4_9FIRM
Serine--tRNA ligase {ECO:0000313|EMBL:CDB86588.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L1_008_000M1_scaffold_833_29
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(25521..26075)
DNA (555bp) protein (185aa)
SH3 type 3 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXC7_9FIRM
SH3 type 3 {ECO:0000313|EMBL:CCY41427.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_833_30
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(26075..26947)
DNA (873bp) protein (291aa)
ParB-like partition protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWS2_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:CDB86586.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
parB; chromosome partitioning protein ParB
Displaying items 1-30 of 68 in total

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