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L1_008_000M1_scaffold_1680_11

Organism: dasL1_008_000M1_concoct_56_sub_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(12986..13546)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor (ECF subfamily) n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J0X5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 290
  • Evalue 6.70e-76
Putative RNA polymerase sigma factor (ECF subfamily) {ECO:0000313|EMBL:CCY42661.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 290
  • Evalue 9.40e-76
RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 186.0
  • Bit_score: 212
  • Evalue 6.60e-53

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Taxonomy

Firmicutes bacterium CAG:124 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGAAGATTCCCAGATCATCGACCTGTATTGGGCAAGGCTGGAACAGGCGATACAGGAGACGGATACGAAGTACGGCGGCTACTGCCGTGCGATTGCCCACAATATTTTGAAGAGCATGGAAGACAGCGAGGAATGCGTGTCGGACACGTGGCTGCGCGCCTGGAACGCGATGCCGCCGCAGCGGCCTTCGGTTCTCTCGGCGTTTTTGGGACGCATCACGCGCAATCTCTCGCTCGACCGCTACAAAGCCGCGCGCGCGGAAAAACGCGGAGGAAGCAGCTTCCCGGCGGCGCTCGACGAGCTGTCGGAGTGCATCCCGGCAGGCGGCAGCGTTGAGCAGACGATGGACGAGCGCGAGCTGGGGCAGGCAATTGACCGGTTTCTGCGCACCATACCGGAAAAGCAGTGCAGTCTGTTTCTGCGCCGGTACTGGTATGCAGAGTCGATCTCGCAGATTGCAGAGCGCTACTCGCTGAAGGAGAACACCGTCAAATCCATTCTGTTCCGCACGCGCGAGCAGCTGCGCAAATTCTTGCAGAAGGAGGGCGTTGCCGTATGA
PROTEIN sequence
Length: 187
MEDSQIIDLYWARLEQAIQETDTKYGGYCRAIAHNILKSMEDSEECVSDTWLRAWNAMPPQRPSVLSAFLGRITRNLSLDRYKAARAEKRGGSSFPAALDELSECIPAGGSVEQTMDERELGQAIDRFLRTIPEKQCSLFLRRYWYAESISQIAERYSLKENTVKSILFRTREQLRKFLQKEGVAV*