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L1_008_000M1_scaffold_1680

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1680_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(243..2084)
DNA (1842bp) protein (614aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIR3_9FIRM
L1_008_000M1_scaffold_1680_2
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2496..3356)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BC10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA50882.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
transporter
L1_008_000M1_scaffold_1680_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(3388..3984)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72333.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L1_008_000M1_scaffold_1680_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(4142..4705)
DNA (564bp) protein (188aa)
Regulatory protein TetR n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0N3_9FIRM
Regulatory protein TetR {ECO:0000313|EMBL:CCX72334.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
TetR family transcriptional regulator
L1_008_000M1_scaffold_1680_5
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(4773..5306)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX90336.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_008_000M1_scaffold_1680_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(5306..6757)
DNA (1452bp) protein (484aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITY0_9FIRM
L1_008_000M1_scaffold_1680_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(6845..7450)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LHH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86928.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
adenylate cyclase
L1_008_000M1_scaffold_1680_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

7610..9643
DNA (2034bp) protein (678aa)
spoIIE; putative stage II sporulation protein E (EC:3.1.3.16)
Putative stage II sporulation protein E n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IU27_9FIRM
Putative stage II sporulation protein E {ECO:0000313|EMBL:CCY40241.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1680_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(9943..11496)
DNA (1554bp) protein (518aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IL74_9FIRM
L1_008_000M1_scaffold_1680_10
unknown

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comp(11727..12989)
DNA (1263bp) protein (421aa)

This feature has no annotations

L1_008_000M1_scaffold_1680_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(12986..13546)
DNA (561bp) protein (187aa)
Putative RNA polymerase sigma factor (ECF subfamily) n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J0X5_9FIRM
Putative RNA polymerase sigma factor (ECF subfamily) {ECO:0000313|EMBL:CCY42661.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
RNA polymerase sigma-70 factor, ECF subfamily
L1_008_000M1_scaffold_1680_12
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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13693..14466
DNA (774bp) protein (258aa)
Putative metallophosphoesterase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LGT7_9FIRM
Putative metallophosphoesterase {ECO:0000313|EMBL:CDB86723.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1680_13
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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14653..16695
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZJG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14775.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Dipeptidase
L1_008_000M1_scaffold_1680_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(16756..17658)
DNA (903bp) protein (301aa)
LysR substrate binding domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLR9_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDB88413.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Transcriptional regulator
L1_008_000M1_scaffold_1680_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17648..18823)
DNA (1176bp) protein (392aa)
Cysteine desulfurase family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2N4_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:EDM97434.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
cysteine desulfurase
L1_008_000M1_scaffold_1680_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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19084..20175
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LQL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88175.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
membrane protein
L1_008_000M1_scaffold_1680_17
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

20172..20279
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88174.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Displaying 17 items

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