ggKbase home page

L1_008_000M1_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_177_1
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2..553)
DNA (552bp) protein (184aa)
YD repeat protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UR84_AKKM8
YD repeat protein
YD repeat protein {ECO:0000313|EMBL:ACD04969.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_008_000M1_scaffold_177_2
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

604..1329
DNA (726bp) protein (242aa)
Conserved Plasmodium protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E668_9BACT
Conserved Plasmodium protein {ECO:0000313|EMBL:CDD97811.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_008_000M1_scaffold_177_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2338..3702)
DNA (1365bp) protein (455aa)
RND efflux system outer membrane lipoprotein NodT family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6D5_9BACT
RND efflux system outer membrane lipoprotein NodT family {ECO:0000313|EMBL:CDD97813.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
NodT family RND efflux system outer membrane lipoprotein
L1_008_000M1_scaffold_177_4
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3733..5097)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E672_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97816.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_008_000M1_scaffold_177_5
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5094..5798)
DNA (705bp) protein (235aa)
ABC transporter related n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6E0_9BACT
ABC transporter related {ECO:0000313|EMBL:CDD97818.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ABC transporter
L1_008_000M1_scaffold_177_6
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5865..7262)
DNA (1398bp) protein (466aa)
Efflux transporter RND family MFP subunit n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E675_9BACT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD97821.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
RND family efflux transporter MFP subunit
L1_008_000M1_scaffold_177_7
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7454..7744
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4L3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97824.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_008_000M1_scaffold_177_8
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8201..8611)
DNA (411bp) protein (137aa)
NUDIX hydrolase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8I8_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:CDD97827.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
NUDIX hydrolase
L1_008_000M1_scaffold_177_9
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8608..9114)
DNA (507bp) protein (169aa)
Phosphodiesterase MJ0936 family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E537_9BACT
Phosphodiesterase MJ0936 family {ECO:0000313|EMBL:CDD97830.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
phosphodiesterase, MJ0936 family
L1_008_000M1_scaffold_177_10
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9111..10088)
DNA (978bp) protein (326aa)
Fmu (Sun) domain protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8J2_9BACT
Fmu (Sun) domain protein {ECO:0000313|EMBL:CDD97832.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Fmu (Sun) domain-containing protein
L1_008_000M1_scaffold_177_11
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10093..11052)
DNA (960bp) protein (320aa)
ROK family protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E687_9BACT
ROK family protein {ECO:0000313|EMBL:CDD97836.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ROK family protein
L1_008_000M1_scaffold_177_12
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11276..12100
DNA (825bp) protein (275aa)
Transcriptional regulator TraR/DksA family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6F8_9BACT
Transcriptional regulator TraR/DksA family {ECO:0000313|EMBL:CDD97838.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
TraR/DksA family transcriptional regulator
L1_008_000M1_scaffold_177_13
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


12134..12307
DNA (174bp) protein (58aa)
50S ribosomal protein L33 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E545_9BACT
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_008_000M1_scaffold_177_14
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


12341..12586
DNA (246bp) protein (82aa)
Ribosomal protein S18 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E692_9BACT
Ribosomal protein S18 {ECO:0000313|EMBL:CDD97841.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
30S ribosomal protein S18
L1_008_000M1_scaffold_177_15
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12694..13488
DNA (795bp) protein (265aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
GTP cyclohydrolase FolE2 n=2 Tax=Akkermansia RepID=GCH4_AKKM8
hypothetical protein
L1_008_000M1_scaffold_177_16
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13510..14268
DNA (759bp) protein (253aa)
Cytochrome c assembly protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6A1_9BACT
Cytochrome c assembly protein {ECO:0000313|EMBL:CDD97851.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
cytochrome c assembly protein
L1_008_000M1_scaffold_177_17
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14268..15290
DNA (1023bp) protein (341aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8K8_9BACT
L1_008_000M1_scaffold_177_18
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15280..16215
DNA (936bp) protein (312aa)
porphobilinogen deaminase (EC:2.5.1.61)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Porphobilinogen deaminase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULP1_AKKM8
L1_008_000M1_scaffold_177_19
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16313..16471)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4T1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97919.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_008_000M1_scaffold_177_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16598..16954)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5B2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97920.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_008_000M1_scaffold_177_21
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17386..20592)
DNA (3207bp) protein (1069aa)
Type I site-specific deoxyribonuclease HsdR family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6G8_9BACT
Type I site-specific deoxyribonuclease HsdR family {ECO:0000313|EMBL:CDD97921.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
type I restriction enzyme
L1_008_000M1_scaffold_177_22
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20610..21827)
DNA (1218bp) protein (406aa)
hsdS2; type I restriction-modification system specificity subunit HsdS2 (EC:3.1.21.3)
Restriction modification system DNA specificity domain-containing protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8R9_9BACT
Restriction modification system DNA specificity domain-containing protein {ECO:0000313|EMBL:CDD97922.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_008_000M1_scaffold_177_23
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21824..23560)
DNA (1737bp) protein (579aa)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4T4_9BACT
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:CDD97924.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
type I restriction-modification system DNA methylase
L1_008_000M1_scaffold_177_24
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(23781..25733)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5B5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97925.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_008_000M1_scaffold_177_25
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26161..28068)
DNA (1908bp) protein (636aa)
DNA mismatch repair protein MutL n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6H3_9BACT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
DNA mismatch repair protein MutL
L1_008_000M1_scaffold_177_26
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28111..28368)
DNA (258bp) protein (86aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8S2_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDD97927.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
thiamine biosynthesis protein ThiS
L1_008_000M1_scaffold_177_27
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

28680..29120
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4T8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97929.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
toxin outer membrane protein
L1_008_000M1_scaffold_177_28
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29225..29785
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5B6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97930.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_008_000M1_scaffold_177_29
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

30001..30162
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E6H8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97931.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L1_008_000M1_scaffold_177_30
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30636..31220)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8S7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97932.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Displaying items 1-30 of 73 in total

View Taxonomy