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L1_008_000M1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 229 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_25_1
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(2..871)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZR60_METSM
Uncharacterized protein {ECO:0000313|EMBL:EFC93757.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
hypothetical protein
L1_008_000M1_scaffold_25_2
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1111..1632
DNA (522bp) protein (174aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PU57_9EURY
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDF28659.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
O-linked GlcNAc transferase
L1_008_000M1_scaffold_25_3
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1643..2887
DNA (1245bp) protein (415aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PRV3_9EURY
O-linked GlcNAc transferase
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDF28658.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_25_4
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

2958..3611
DNA (654bp) protein (218aa)
O-linked GlcNAc transferase n=2 Tax=Methanobrevibacter smithii RepID=A5UP65_METS3
O-linked GlcNAc transferase
O-linked GlcNAc transferase {ECO:0000313|EMBL:ABQ87993.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_25_5
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3678..5111)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ADF6_METSM
Uncharacterized protein {ECO:0000313|EMBL:EEE41496.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
ATPase
L1_008_000M1_scaffold_25_6
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

5358..6242
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter smithii RepID=B9ADF5_METSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ87996.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_25_7
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

6461..7873
DNA (1413bp) protein (471aa)
putative nicotinate phosphoribosyltransferase (EC:2.4.2.12)
Nicotinamide phosphoribosyltransferase(Nampt) n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PVA0_9EURY
Nicotinamide phosphoribosyltransferase(Nampt) {ECO:0000313|EMBL:CDF28651.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_25_8
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7875..8225
DNA (351bp) protein (117aa)
Uncharacterized protein n=4 Tax=Methanobrevibacter RepID=B9ADF3_METSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF28650.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_25_9
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8236..9159
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZR69_METSM
Uncharacterized protein {ECO:0000313|EMBL:EFC93766.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
tubulin-like protein
L1_008_000M1_scaffold_25_10
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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9180..9353
DNA (174bp) protein (58aa)
Transcription initiation factor IIB n=3 Tax=Methanobrevibacter RepID=B9ADF1_METSM
Transcription initiation factor IIB {ECO:0000313|EMBL:CDF28647.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
tfb; transcription initiation factor IIB
L1_008_000M1_scaffold_25_11
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

9378..9539
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter RepID=B9ADF0_METSM
Conserved domain protein {ECO:0000313|EMBL:CDF28646.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_25_12
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9721..9921)
DNA (201bp) protein (67aa)
Exodeoxyribonuclease VII, small subunit {ECO:0000313|EMBL:EEE41489.1}; EC=3.1.11.6 {ECO:0000313|EMBL:EEE41489.1};; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
exodeoxyribonuclease VII n=1 Tax=Methanobrevibacter smithii RepID=UPI00037405ED
exodeoxyribonuclease VII small subunit
L1_008_000M1_scaffold_25_13
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9938..10264)
DNA (327bp) protein (109aa)
exoribonuclease VII, large subunit, XseA (EC:3.1.11.6)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI000361DD10
Exodeoxyribonuclease 7 large subunit {ECO:0000313|EMBL:CDF28644.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_25_14
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10296..11522)
DNA (1227bp) protein (409aa)
exoribonuclease VII, large subunit, XseA (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PU45_9EURY
Exodeoxyribonuclease 7 large subunit {ECO:0000313|EMBL:CDF28644.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_25_15
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11899..12978
DNA (1080bp) protein (360aa)
Site-specific recombinase, phage integrase family n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ADE7_METSM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEE41487.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
integrase-recombinase protein
L1_008_000M1_scaffold_25_16
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13731..14162)
DNA (432bp) protein (144aa)
Conserved hypothetical membrane protein Msm_0003 n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UP80_METS3
hypothetical protein
Conserved hypothetical membrane protein Msm_0003 {ECO:0000313|EMBL:ABQ86208.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_25_17
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14250..14792)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PV91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF28641.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
lysine decarboxylase
L1_008_000M1_scaffold_25_18
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14832..15197)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter RepID=B9ADE4_METSM
Uncharacterized protein {ECO:0000313|EMBL:EFC93775.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
hypothetical protein
L1_008_000M1_scaffold_25_19
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15386..16204)
DNA (819bp) protein (273aa)
Putative methyltransferase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PU41_9EURY
Putative methyltransferase {ECO:0000313|EMBL:CDF28639.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
SAM-dependent methyltransferase
L1_008_000M1_scaffold_25_20
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

16412..16987
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PRT7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF28638.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
GNAT family N-acetyltransferase
L1_008_000M1_scaffold_25_21
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16996..17505)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UP88_METS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ86216.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_25_22
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17767..18573)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZR96_METSM
Uncharacterized protein {ECO:0000313|EMBL:EFC93793.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
hypothetical protein
L1_008_000M1_scaffold_25_23
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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18874..19248
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI0003801D94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN16953.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
L1_008_000M1_scaffold_25_24
unknown

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comp(19458..19673)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI000366CEA2
L1_008_000M1_scaffold_25_25
unknown

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comp(19652..19951)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI000366DEF1
L1_008_000M1_scaffold_25_26
unknown

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comp(19954..20610)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00037655A1
L1_008_000M1_scaffold_25_27
unknown

Not on your lists

21407..21583
DNA (177bp) protein (59aa)

This feature has no annotations

L1_008_000M1_scaffold_25_28
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

22624..22950
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UNV1_METS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ87879.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_25_29
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23111..23371)
DNA (261bp) protein (87aa)
hypothetical protein n=2 Tax=Methanobrevibacter smithii RepID=UPI000381A2F4
Uncharacterized protein {ECO:0000313|EMBL:EFC93781.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
L1_008_000M1_scaffold_25_30
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23368..23565)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI000365A50B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ87870.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Displaying items 1-30 of 229 in total

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