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L1_008_000M1_scaffold_296

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_296_1
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1..279
DNA (279bp) protein (93aa)
Parallel beta-helix repeat protein (3 repeats) n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZS13_METSM
Parallel beta-helix repeat protein (3 repeats) {ECO:0000313|EMBL:EFC92613.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
adhesin-like protein
L1_008_000M1_scaffold_296_2
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(332..550)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Methanobrevibacter RepID=B9ACK9_METSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF28357.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_296_3
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(561..1262)
DNA (702bp) protein (234aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=4 Tax=Methanobrevibacter RepID=A5UJW1_METS3
L1_008_000M1_scaffold_296_4
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(1247..1684)
DNA (438bp) protein (146aa)
UPF0179 protein Msm_0285 n=4 Tax=Methanobrevibacter RepID=Y285_METS3
hypothetical protein
UPF0179 protein METSMIF1_03650 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
L1_008_000M1_scaffold_296_5
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(1681..2727)
DNA (1047bp) protein (349aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMAP-Rule:MF_00497};; EC=1.1.1.261 {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015268};; Enantiomeric glycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00497}; sn-glycerol-1-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ACK6_METSM
glycerol 1-phosphate dehydrogenase
L1_008_000M1_scaffold_296_6
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2879..4288
DNA (1410bp) protein (470aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
Proline--tRNA ligase n=3 Tax=Methanobrevibacter RepID=SYP_METS3
L1_008_000M1_scaffold_296_7
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4299..4973
DNA (675bp) protein (225aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
2-phospho-L-lactate guanylyltransferase n=3 Tax=Methanobrevibacter RepID=B9ACK4_METSM
hypothetical protein
L1_008_000M1_scaffold_296_8
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4974..5714
DNA (741bp) protein (247aa)
phosphomethylpyrimidine kinase (HMPP-kinase), ThiD (EC:2.7.1.49)
Phosphomethylpyrimidine kinase (HMPP-kinase), ThiD {ECO:0000313|EMBL:ABQ86494.1}; EC=2.7.1.49 {ECO:0000313|EMBL:ABQ86494.1};; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Phosphomethylpyrimidine kinase (HMPP-kinase), ThiD n=3 Tax=Methanobrevibacter smithii RepID=A5UJW6_METS3
L1_008_000M1_scaffold_296_9
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(5718..6476)
DNA (759bp) protein (253aa)
Nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB n=3 Tax=Methanobrevibacter smithii RepID=A5UJW7_METS3
nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB
Nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB {ECO:0000313|EMBL:ABQ86495.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_296_10
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(6487..7227)
DNA (741bp) protein (247aa)
ABC transporter, permease protein n=3 Tax=Methanobrevibacter RepID=B9ACK1_METSM
nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC
ABC transporter permease protein {ECO:0000313|EMBL:CDF28349.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_296_11
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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7397..8332
DNA (936bp) protein (312aa)
Predicted metal-dependent membrane protease n=3 Tax=Methanobrevibacter RepID=A5UJW9_METS3
metal-dependent membrane protease
Predicted metal-dependent membrane protease {ECO:0000313|EMBL:CDF28348.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_296_12
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(8350..10473)
DNA (2124bp) protein (708aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EEE41189.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEE41189.1};; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
Heavy metal translocating P-type ATPase n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ACJ9_METSM
cation transporter HAD ATPase
L1_008_000M1_scaffold_296_13
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(10484..10744)
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter RepID=B9ACJ8_METSM
Uncharacterized protein {ECO:0000313|EMBL:CDF28346.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_296_14
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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10918..11748
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PSJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF28345.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
formate dehydrogenase accessory protein, FdhD
L1_008_000M1_scaffold_296_15
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(11751..12077)
DNA (327bp) protein (109aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ACJ6_METSM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EEE41186.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
putative carboxymuconolactone decarboxylase
L1_008_000M1_scaffold_296_16
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12289..13428
DNA (1140bp) protein (380aa)
Site-specific recombinase, phage integrase family n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZS28_METSM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFC92628.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
DNA intergrase/recombinase
L1_008_000M1_scaffold_296_17
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(13513..13950)
DNA (438bp) protein (146aa)
PIN domain protein n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZS29_METSM
PIN domain protein {ECO:0000313|EMBL:EFC92629.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
hypothetical protein
L1_008_000M1_scaffold_296_18
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(13947..14180)
DNA (234bp) protein (78aa)
SpoVT/AbrB-like protein n=2 Tax=Methanobrevibacter smithii RepID=D2ZS30_METSM
SpoVT/AbrB-like protein {ECO:0000313|EMBL:EFC92630.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
hypothetical protein
L1_008_000M1_scaffold_296_19

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14621..16306
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS33_METMA
Marine sediment metagenome DNA, contig: S01H4_L00922 {ECO:0000313|EMBL:GAG67768.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_296_20
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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16376..18175
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ACL8_METSM
Uncharacterized protein {ECO:0000313|EMBL:EEE41208.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
hypothetical protein
L1_008_000M1_scaffold_296_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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18175..18909
DNA (735bp) protein (245aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
L1_008_000M1_scaffold_296_22

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18913..20022
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Ostreococcus tauri virus 1 RepID=C7U0K9_9PHYC
Uncharacterized protein {ECO:0000313|EMBL:CAY39765.1}; TaxID=642926 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; unclassified Phycodnaviridae.;" source="Ostreococcus tauri virus 1.;"
L1_008_000M1_scaffold_296_23
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(20069..20401)
DNA (333bp) protein (111aa)
Predicted transposase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PTX3_9EURY
Predicted transposase {ECO:0000313|EMBL:CDF28549.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
transposase
L1_008_000M1_scaffold_296_24
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(20457..21290)
DNA (834bp) protein (278aa)
Predicted transposase n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UJD7_METS3
transposase
Predicted transposase {ECO:0000313|EMBL:ABQ86315.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_296_25
unknown

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comp(21541..22206)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI0003827A0A
L1_008_000M1_scaffold_296_26
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(22450..23391)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00035F8C44
archaeal ATPase
Archaeal ATPase {ECO:0000313|EMBL:AGN16891.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
L1_008_000M1_scaffold_296_27
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(23998..24423)
DNA (426bp) protein (142aa)
Predicted exosome subunit n=4 Tax=Methanobrevibacter RepID=A5UJX4_METS3
hypothetical protein
Predicted exosome subunit {ECO:0000313|EMBL:CDF29941.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_296_28
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(24454..25008)
DNA (555bp) protein (185aa)
50S ribosomal protein L15e n=4 Tax=Methanobrevibacter RepID=A5UJX5_METS3
50S ribosomal protein L15e
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_296_29
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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25221..25619
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter RepID=D2ZS49_METSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF29939.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_296_30
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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25899..27518
DNA (1620bp) protein (540aa)
Peptide/nickel ABC transporter, solute-binding component n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UJX7_METS3
peptide/nickel ABC transporter, solute-binding component
Peptide/nickel ABC transporter, solute-binding component {ECO:0000313|EMBL:ABQ86505.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Displaying items 1-30 of 76 in total

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