ggKbase home page

L1_008_000M1_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_308_1
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

716..1681
DNA (966bp) protein (322aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; Methylene-H(4)MPT reductase {ECO:0000256|HAMAP-Rule:MF_01091}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PUI7_9EURY
L1_008_000M1_scaffold_308_2
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1710..2501)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AGN9_METSM
Uncharacterized protein {ECO:0000313|EMBL:EEE42629.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
DNA repair photolyase, SplB
L1_008_000M1_scaffold_308_3
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

2693..3775
DNA (1083bp) protein (361aa)
Radical SAM protein, TIGR01210 family n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AGN8_METSM
Radical SAM protein, TIGR01210 family {ECO:0000313|EMBL:EEE42628.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
Fe-S oxidoreductase
L1_008_000M1_scaffold_308_4
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3812..5104)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036FD69B
Uncharacterized protein {ECO:0000313|EMBL:CDF28404.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_308_5
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

5243..5725
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter smithii RepID=B9AGN6_METSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ86751.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_308_6
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

5753..7033
DNA (1281bp) protein (427aa)
Predicted nucleotidyltransferase, cytidyltransferase-related n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UKM4_METS3
nucleotidyltransferase, cytidyltransferase-related
Predicted nucleotidyltransferase, cytidyltransferase-related {ECO:0000313|EMBL:ABQ86752.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_308_7
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7023..7757)
DNA (735bp) protein (245aa)
6-phosphogluconate dehydrogenase, beta-hydroxyacid dehydrogenase related, MmsB n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UKM5_METS3
6-phosphogluconate dehydrogenase, beta-hydroxyacid dehydrogenase related, MmsB
6-phosphogluconate dehydrogenase, beta-hydroxyacid dehydrogenase related, MmsB {ECO:0000313|EMBL:ABQ86753.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_308_8
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7754..8365)
DNA (612bp) protein (204aa)
Cytochrome C biogenesis protein transmembrane region n=2 Tax=Methanobrevibacter smithii RepID=B9AGN3_METSM
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:EFC93818.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
cytochrome C-type biogenesis protein, DsbD
L1_008_000M1_scaffold_308_9
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8375..8836)
DNA (462bp) protein (154aa)
Protein disulfide-isomerase thioredoxin-related n=2 Tax=Methanobrevibacter RepID=R7PTE1_9EURY
Protein disulfide-isomerase thioredoxin-related {ECO:0000313|EMBL:CDF28409.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
protein disulfide-isomerase, thioredoxin-related
L1_008_000M1_scaffold_308_10
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8845..9711)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Methanobrevibacter RepID=B9AGN1_METSM
Uncharacterized protein {ECO:0000313|EMBL:CDF28410.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_308_11
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9712..9915)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AGN0_METSM
Uncharacterized protein {ECO:0000313|EMBL:EFC93821.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
thiamine biosynthesis sulfur transfer protein
L1_008_000M1_scaffold_308_12
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9920..10837)
DNA (918bp) protein (306aa)
ATPase, PP-loop superfamily n=2 Tax=Methanobrevibacter smithii RepID=A5UKN0_METS3
PP family ATPase
TIGR00269 family protein {ECO:0000313|EMBL:EFC93822.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
L1_008_000M1_scaffold_308_13
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10846..12003)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Methanobrevibacter RepID=D2ZN05_METSM
Uncharacterized protein {ECO:0000313|EMBL:CDF28413.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
von Willebrand factor type A domain-containing protein
L1_008_000M1_scaffold_308_14
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12017..12874)
DNA (858bp) protein (286aa)
MoxR-like ATPase n=2 Tax=Methanobrevibacter smithii RepID=A5UKN2_METS3
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:ABQ86760.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_308_15
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12948..14552)
DNA (1605bp) protein (535aa)
Dihydropteroate synthase-related protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PSR6_9EURY
Dihydropteroate synthase-related protein {ECO:0000313|EMBL:CDF28415.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
dihydropteroate synthase
L1_008_000M1_scaffold_308_16
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

14768..15292
DNA (525bp) protein (175aa)
pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG n=4 Tax=Methanobrevibacter RepID=A5UKN4_METS3
Pyruvate:ferredoxin oxidoreductase gamma subunit PorG {ECO:0000313|EMBL:CDF28416.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_308_17
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

15318..15560
DNA (243bp) protein (81aa)
pyruvate:ferredoxin oxidoreductase, delta subunit, PorD (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, delta subunit, PorD n=4 Tax=Methanobrevibacter RepID=A5UKN5_METS3
Pyruvate:ferredoxin oxidoreductase delta subunit PorD {ECO:0000313|EMBL:CDF28417.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_308_18
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

15572..16717
DNA (1146bp) protein (382aa)
pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA n=2 Tax=Methanobrevibacter smithii RepID=A5UKN6_METS3
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein {ECO:0000313|EMBL:EEE42613.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
L1_008_000M1_scaffold_308_19
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

16720..17586
DNA (867bp) protein (289aa)
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase, beta subunit, PorB n=4 Tax=Methanobrevibacter RepID=A5UKN7_METS3
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EEE42612.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
L1_008_000M1_scaffold_308_20
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

17600..18103
DNA (504bp) protein (168aa)
formate dehydrogenase, iron-sulfur subunit (EC:1.2.99.2)
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:ABQ86766.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ABQ86766.1};; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Formate dehydrogenase, iron-sulfur subunit n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UKN8_METS3
L1_008_000M1_scaffold_308_21
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18117..18362
DNA (246bp) protein (82aa)
Formate dehydrogenase, iron-sulfur subunit n=5 Tax=Methanobrevibacter RepID=A5UKN9_METS3
formate dehydrogenase, iron-sulfur subunit
Formate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:CDF28421.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_308_22
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18467..19297
DNA (831bp) protein (277aa)
fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase, alpha subunit {ECO:0000313|EMBL:ABQ86768.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ABQ86768.1};; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Fumarate hydratase, alpha subunit n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UKP0_METS3
L1_008_000M1_scaffold_308_23
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19329..20021)
DNA (693bp) protein (231aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PR58_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
phosphate uptake regulator, PhoU
L1_008_000M1_scaffold_308_24
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20031..20780)
DNA (750bp) protein (250aa)
phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
Phosphate ABC transporter, ATPase component, PstB n=3 Tax=Methanobrevibacter RepID=A5UKP2_METS3
L1_008_000M1_scaffold_308_25
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20784..21632)
DNA (849bp) protein (283aa)
Phosphate ABC transporter, permease component, PstA n=2 Tax=Methanobrevibacter RepID=A5UKP3_METS3
phosphate ABC transporter, permease component, PstA
Phosphate ABC transporter permease component PstA {ECO:0000313|EMBL:CDF28425.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_308_26
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21629..22504)
DNA (876bp) protein (292aa)
Phosphate ABC transporter, permease component, PstC n=3 Tax=Methanobrevibacter RepID=A5UKP4_METS3
phosphate ABC transporter, permease component, PstC
Phosphate ABC transporter permease component PstC {ECO:0000313|EMBL:CDF28426.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_308_27
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22520..23329)
DNA (810bp) protein (270aa)
Phosphate binding protein n=3 Tax=Methanobrevibacter RepID=B9AGL4_METSM
Phosphate ABC transporter phosphate-binding protein {ECO:0000313|EMBL:CDF28427.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
phosphate ABC transporter, phosphate-binding component, PstS
L1_008_000M1_scaffold_308_28
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23493..24374)
DNA (882bp) protein (294aa)
PhoU family protein n=2 Tax=Methanobrevibacter smithii RepID=B9AGL3_METSM
PhoU family protein {ECO:0000313|EMBL:EFC93838.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
phosphate transport system regulator-like protein, PhoU
L1_008_000M1_scaffold_308_29
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24380..25183)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UKP7_METS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ86775.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_308_30
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25282..26784)
DNA (1503bp) protein (501aa)
5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC n=3 Tax=Methanobrevibacter smithii RepID=B9AGL1_METSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ86776.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Displaying items 1-30 of 73 in total

View Taxonomy