ggKbase home page

L1_008_000M1_scaffold_745

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_745_1
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

2..877
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Methanobrevibacter RepID=R7PX69_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29724.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
adhesin-like protein
L1_008_000M1_scaffold_745_2
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(902..1744)
DNA (843bp) protein (281aa)
dTDP-4-dehydrorhamnose reductase, RfbD (EC:1.1.1.133)
spore coat protein n=1 Tax=Methanobrevibacter smithii RepID=UPI000369B259
Uncharacterized protein {ECO:0000313|EMBL:CDF29723.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_745_3
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1841..3079
DNA (1239bp) protein (413aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase (EC:1.1.1.-)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYT5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29722.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_745_4
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3069..4244)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYC5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29721.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_745_5
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4568..5776)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWI2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29720.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_745_6
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

6070..7317
DNA (1248bp) protein (416aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PX66_9EURY
L1_008_000M1_scaffold_745_7
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7322..7804
DNA (483bp) protein (161aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PUX4_9EURY
L1_008_000M1_scaffold_745_8
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7776..8786
DNA (1011bp) protein (337aa)
3-isopropylmalate dehydrogenase, LeuB (EC:1.1.1.85)
Putative 3-isopropylmalate dehydrogenase n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFU0_METSM
Putative 3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EEE42330.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
L1_008_000M1_scaffold_745_9
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8795..11128
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYB9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29716.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
glycosyl transferase family protein
L1_008_000M1_scaffold_745_10
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11175..11267
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29715.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_745_11
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11283..11699
DNA (417bp) protein (139aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PX62_9EURY
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L1_008_000M1_scaffold_745_12
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11708..12646
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PUX1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29713.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
DNA-binding protein
L1_008_000M1_scaffold_745_13
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12664..14355)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29712.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
glycosyl transferase family protein
L1_008_000M1_scaffold_745_14
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14431..14946)
DNA (516bp) protein (172aa)
Nitroreductase family protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFT5_METSM
Nitroreductase family protein {ECO:0000313|EMBL:EEE42325.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
nitroreductase NADH oxidase
L1_008_000M1_scaffold_745_15
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

15276..17423
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29710.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
transcriptional accessory protein S1 RNA binding family protein
L1_008_000M1_scaffold_745_16
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17552..18478)
DNA (927bp) protein (309aa)
glycosyl transferase n=1 Tax=Methanobrevibacter smithii RepID=UPI00037233C7
Uncharacterized protein {ECO:0000313|EMBL:CDF29709.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
glycosyltransferase
L1_008_000M1_scaffold_745_17
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

19011..20321
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI0003768C29
Uncharacterized protein {ECO:0000313|EMBL:CDF29708.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_745_18
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

20436..20864
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29707.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
GtrA-like surface polysaccharide biosynthesis protein, GtrA
L1_008_000M1_scaffold_745_19
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

21015..22034
DNA (1020bp) protein (340aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
phosphoribosylaminoimidazole carboxylase (NCAIR mutase), PurE (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, catalytic subunit n=2 Tax=Methanobrevibacter RepID=B9AFS9_METSM
L1_008_000M1_scaffold_745_20
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

22044..23300
DNA (1257bp) protein (419aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWG8_9EURY
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD {ECO:0000313|EMBL:CDF29705.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase, UbiD
L1_008_000M1_scaffold_745_21
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

23303..24565
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036B0B35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEE42317.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
L1_008_000M1_scaffold_745_22
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24555..25601)
DNA (1047bp) protein (349aa)
pyruvate formate-lyase activating enzyme, PflA (EC:1.97.1.4)
radical SAM protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036B840A
Radical SAM domain protein {ECO:0000313|EMBL:EEE42316.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
L1_008_000M1_scaffold_745_23
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25546..26466)
DNA (921bp) protein (307aa)
thiamine monphosphate kinase, ThiL (EC:2.7.4.16)
Thiamine monphosphate kinase ThiL n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYA6_9EURY
Thiamine monphosphate kinase ThiL {ECO:0000313|EMBL:CDF29701.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_745_24
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26573..28171)
DNA (1599bp) protein (533aa)
Putative adhesin-like protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PWG3_9EURY
Putative adhesin-like protein {ECO:0000313|EMBL:CDF29700.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
putative adhesin-like protein
L1_008_000M1_scaffold_745_25
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28275..28766)
DNA (492bp) protein (164aa)
Sirohydrochlorin cobaltochelatase {ECO:0000256|HAMAP-Rule:MF_00785}; EC=4.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00785};; CbiXS {ECO:0000256|HAMAP-Rule:MF_00785}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Sirohydrochlorin cobaltochelatase n=3 Tax=Methanobrevibacter RepID=B9AFS2_METSM
L1_008_000M1_scaffold_745_26
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28808..29734)
DNA (927bp) protein (309aa)
sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Sirohydrochlorin cobaltochelatase n=2 Tax=Methanobrevibacter RepID=B9AFS1_METSM
Uncharacterized protein {ECO:0000313|EMBL:CDF29698.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_745_27
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29706..30104)
DNA (399bp) protein (133aa)
Predicted nucleic-acid-binding protein containing a Zn-ribbon n=4 Tax=Methanobrevibacter RepID=A5UMQ6_METS3
nucleic-acid-binding protein containing a Zn-ribbon
Predicted nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:ABQ87484.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_745_28
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30223..31428)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFR9_METSM
Uncharacterized protein {ECO:0000313|EMBL:EEE42309.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
ATPase
L1_008_000M1_scaffold_745_29
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

31696..32637
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AFR8_METSM
hypothetical protein
Conserved hypothetical membrane protein Msm_1277 {ECO:0000313|EMBL:ABQ87482.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_745_30
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

32637..33503
DNA (867bp) protein (289aa)
Uncharacterized protein n=3 Tax=Methanobrevibacter RepID=B9AFR7_METSM
Uncharacterized protein {ECO:0000313|EMBL:CDF29694.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy