ggKbase home page

L1_008_000M1_scaffold_1412_11

Organism: dasL1_008_000M1_concoct_61_fa

near complete RP 30 / 55 MC: 1 BSCG 19 / 51 ASCG 38 / 38
Location: comp(7400..8227)

Top 3 Functional Annotations

Value Algorithm Source
transposase ISM1, partial n=1 Tax=Methanobrevibacter smithii RepID=UPI00036FBEC0 similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 275.0
  • Bit_score: 542
  • Evalue 1.90e-151
IS element (transposase remnant) similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 275.0
  • Bit_score: 541
  • Evalue 1.20e-151
IS element (Transposase remnant) {ECO:0000313|EMBL:ABQ86732.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 275.0
  • Bit_score: 541
  • Evalue 5.90e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanobrevibacter smithii → Methanobrevibacter → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 828
ATGGATAAAATACCTAGAATAATGAAAATTGGATATCAATCACTTCGTAAAATAAGTAAATACTTTGAAATATTCCTTGGAATCCGTGTATCTCATCAAACAATCAAGAATTGGTCCAATAAAAATCACAAGGAAACAATCAACAACGAAGAATTTGAATATTCTGGCTATTATGTATATGATGAGCAATTTTTAAGACTTAATGGAGTCAAACATTACAAATTAACATTATTTGATGCTATACTTAATGTTCCAGTCTCAGAACGAATAGTACGTCGCAGAATACCAAAAAATACTAAAAAATTTATCTTAGATTCAACGAAAAATAAACCATTTATTTGCTTAACAACAGATTTATTTCCAATGTATCGCAATGTAGCCGATGAAATGGGAGTAAATCATCAATTATGCACATTTCATTTATTTCAAACAATAAATCACAAATTAAAAGTCTACTGCAGAAGAAACAAGATTAACAAAAAACAAAGAGAACATATCTATGAAAATGCACAAGAATTAAAAAACTGTTTCAGACAAAATTCAACAAAAGAAGCAATAGGACAATTTAAACAATATTTACAAAATTATGTGGCCATACCAGTAGTATTAAAAGATTTTATAAGTAAACACATCATTAATCACTTTCACAGATATGTACAACACTTAGATGATGAAAATATTGAAAAAACATCGAACAAAGTCGAGAATTACTACAGACAAACTAACCCAGAAAAAATAAAGAAATTATACAAAACTAAAAACGGAATTCTGACATTTTTAAACTACCAAATGGAAAATTGGACACAAAAACACATAAAAATCAAATAA
PROTEIN sequence
Length: 276
MDKIPRIMKIGYQSLRKISKYFEIFLGIRVSHQTIKNWSNKNHKETINNEEFEYSGYYVYDEQFLRLNGVKHYKLTLFDAILNVPVSERIVRRRIPKNTKKFILDSTKNKPFICLTTDLFPMYRNVADEMGVNHQLCTFHLFQTINHKLKVYCRRNKINKKQREHIYENAQELKNCFRQNSTKEAIGQFKQYLQNYVAIPVVLKDFISKHIINHFHRYVQHLDDENIEKTSNKVENYYRQTNPEKIKKLYKTKNGILTFLNYQMENWTQKHIKIK*