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L1_008_000M1_scaffold_1412

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1412_1
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(949..1167)
DNA (219bp) protein (73aa)
hypothetical protein, partial n=1 Tax=Methanobrevibacter smithii RepID=UPI0003679FC2
transposase
Predicted transposase {ECO:0000313|EMBL:ABQ86665.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_2
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1222..1533
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036A2684
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ86740.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_3
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1574..3313
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI0003732E05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU72256.1}; TaxID=1147128 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides (strain PRL2011).;"
L1_008_000M1_scaffold_1412_4
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

3401..4000
DNA (600bp) protein (200aa)
adenine/cytosine DNA methyltransferase (EC:2.1.1.37)
Adenine/cytosine DNA methyltransferase {ECO:0000313|EMBL:ABQ86736.1}; EC=2.1.1.37 {ECO:0000313|EMBL:ABQ86736.1};; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Adenine/cytosine DNA methyltransferase n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UKK8_METS3
L1_008_000M1_scaffold_1412_5
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(4047..4943)
DNA (897bp) protein (299aa)
Predicted O-linked GlcNAc transferase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PYR7_9EURY
Predicted O-linked GlcNAc transferase {ECO:0000313|EMBL:CDF29861.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
O-linked GlcNAc transferase
L1_008_000M1_scaffold_1412_6
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

5118..5804
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PZ68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF29862.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
hypothetical protein
L1_008_000M1_scaffold_1412_7
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5911..6237)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PRS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF28623.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_1412_8
unknown

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comp(6285..6458)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_008_000M1_scaffold_1412_9
unknown

Not on your lists

comp(6497..6643)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_1412_10
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7137..7268
DNA (132bp) protein (44aa)
Transposase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PVE3_9EURY
Transposase {ECO:0000313|EMBL:CDF28701.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
transposase
L1_008_000M1_scaffold_1412_11
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7400..8227)
DNA (828bp) protein (276aa)
transposase ISM1, partial n=1 Tax=Methanobrevibacter smithii RepID=UPI00036FBEC0
IS element (transposase remnant)
IS element (Transposase remnant) {ECO:0000313|EMBL:ABQ86732.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_12
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8247..8546)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00036FDDCF
IS element (transposase remnant)
IS element (Transposase remnant) {ECO:0000313|EMBL:ABQ86733.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_13
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8971..10815)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ANF1_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY99462.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM; P-10747 / NBRC 102637 / 172P1).;"
hypothetical protein
L1_008_000M1_scaffold_1412_14
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

10913..11761
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2374 RepID=D2ZS34_METSM
Uncharacterized protein {ECO:0000313|EMBL:EFC92634.1}; TaxID=521002 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2374.;"
L1_008_000M1_scaffold_1412_15
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11809..12207)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ADD4_METSM
Uncharacterized protein {ECO:0000313|EMBL:EEE41474.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
hypothetical protein
L1_008_000M1_scaffold_1412_16
unknown

Not on your lists

comp(12417..13343)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI00035C5E75
L1_008_000M1_scaffold_1412_17
unknown

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comp(13359..14114)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI000373BCAC
L1_008_000M1_scaffold_1412_18
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14306..14785)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PVR6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDF28622.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
L1_008_000M1_scaffold_1412_19
Methanobrevibacter smithii CAG:186, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14978..15217)
DNA (240bp) protein (80aa)
Predicted transposase n=1 Tax=Methanobrevibacter smithii CAG:186 RepID=R7PTX3_9EURY
Predicted transposase {ECO:0000313|EMBL:CDF28549.1}; TaxID=1263088 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter; environmental samples.;" source="Methanobrevibacter smithii CAG:186.;"
transposase
L1_008_000M1_scaffold_1412_20
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15227..15463)
DNA (237bp) protein (79aa)
Predicted transposase n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UJD7_METS3
transposase
Predicted transposase {ECO:0000313|EMBL:ABQ86315.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_21
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15604..16041)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Methanobrevibacter smithii RepID=UPI0003733258
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ86316.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_22
unknown

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comp(16529..16684)
DNA (156bp) protein (52aa)
hypothetical protein n=2 Tax=Methanobrevibacter smithii RepID=UPI00036E36FA
L1_008_000M1_scaffold_1412_23
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16752..18851)
DNA (2100bp) protein (700aa)
KAP family P-loop domain protein n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9ACJ1_METSM
KAP family P-loop domain protein {ECO:0000313|EMBL:EEE41181.1}; TaxID=483214 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
hypothetical protein
L1_008_000M1_scaffold_1412_24
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18852..20897)
DNA (2046bp) protein (682aa)
Predicted ATP-dependent protease La, Lon n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UP31_METS3
ATP-dependent protease La, Lon
Predicted ATP-dependent protease La, Lon {ECO:0000313|EMBL:ABQ87959.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_25
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20907..23408)
DNA (2502bp) protein (834aa)
Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UP30_METS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ87958.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_008_000M1_scaffold_1412_26
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23424..23579)
DNA (156bp) protein (52aa)
Predicted type II restriction enzyme, methylase subunit n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UP25_METS3
type II restriction enzyme, methylase subunit
Predicted type II restriction enzyme, methylase subunit {ECO:0000313|EMBL:ABQ87953.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
Displaying 26 items

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