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L1_008_000M1_scaffold_1391

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1391_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(1..252)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75100.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
transporter, NhaC family (TC 2.A.35)
L1_008_000M1_scaffold_1391_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(487..1932)
DNA (1446bp) protein (482aa)
Transporter n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWZ1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative sodium/solute symporter
L1_008_000M1_scaffold_1391_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2451..3305
DNA (855bp) protein (285aa)
Phosphate ABC transporter phosphate-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL92_9FIRM
Phosphate ABC transporter phosphate-binding protein {ECO:0000313|EMBL:CDB26243.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pstS; phosphate ABC transporter phosphate-binding protein
L1_008_000M1_scaffold_1391_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3382..4275
DNA (894bp) protein (298aa)
Phosphate ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJQ2_9FIRM
Phosphate ABC transporter permease protein {ECO:0000313|EMBL:CDB26242.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pstC; phosphate ABC transporter permease protein
L1_008_000M1_scaffold_1391_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4279..5130
DNA (852bp) protein (284aa)
Phosphate ABC transporter permease protein n=2 Tax=root RepID=R6GYB8_9FIRM
Phosphate ABC transporter permease protein {ECO:0000313|EMBL:CDB26241.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pstA; phosphate ABC transporter permease protein
L1_008_000M1_scaffold_1391_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5140..5895
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pstB; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP92_9FIRM
L1_008_000M1_scaffold_1391_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5895..6539
DNA (645bp) protein (215aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWY7_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
phosphate uptake regulator PhoU
L1_008_000M1_scaffold_1391_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6543..7217
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL88_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB26238.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_1391_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7214..8875
DNA (1662bp) protein (554aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
phoR; OmpR family two component system phosphate regulon sensor histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJP5_9FIRM
L1_008_000M1_scaffold_1391_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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8949..9713
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative Baf family transcriptional acitvator (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUA6_9FIRM
L1_008_000M1_scaffold_1391_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9738..10523
DNA (786bp) protein (262aa)
HAD hydrolase family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTD6_9FIRM
HAD hydrolase family {ECO:0000313|EMBL:CDB24984.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1391_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10673..11740
DNA (1068bp) protein (356aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKK1_9FIRM
L1_008_000M1_scaffold_1391_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(11813..13777)
DNA (1965bp) protein (655aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFK6_9FIRM
L1_008_000M1_scaffold_1391_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14242..14991
DNA (750bp) protein (250aa)
exoA; exodeoxyribonuclease (EC:3.1.11.2)
Exodeoxyribonuclease n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HK18_9FIRM
Exodeoxyribonuclease {ECO:0000313|EMBL:CDB26337.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_1391_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15054..16499
DNA (1446bp) protein (482aa)
Putative MerR family transcriptional regulator n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPJ0_9FIRM
Putative MerR family transcriptional regulator {ECO:0000313|EMBL:CDB26335.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative MerR family transcriptional regulator
L1_008_000M1_scaffold_1391_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(16616..19246)
DNA (2631bp) protein (877aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0C4_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCX73640.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L1_008_000M1_scaffold_1391_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19488..20336
DNA (849bp) protein (283aa)
holB; putative DNA polymerase III subunit delta' (EC:2.7.7.7)
Putative DNA polymerase III subunit delta n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTE4_9FIRM
Putative DNA polymerase III subunit delta {ECO:0000313|EMBL:CDB27695.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_1391_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

20362..21648
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73642.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L1_008_000M1_scaffold_1391_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21652..22500
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H159_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27694.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1391_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22514..22810
DNA (297bp) protein (99aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQK4_9FIRM
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDB27693.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1391_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22821..23582
DNA (762bp) protein (254aa)
TatD family hydrolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HP59_9FIRM
TatD family hydrolase {ECO:0000313|EMBL:CDB27692.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative deoxyribonuclease
L1_008_000M1_scaffold_1391_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(23687..23995)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72673.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
transporter, NhaC family (TC 2.A.35)
Displaying 22 items

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