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L1_008_000M1_scaffold_59

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Displaying items 1-30 of 167 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_59_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..396
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72604.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_008_000M1_scaffold_59_2
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(995..1174)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7FY47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18637.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_59_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1354..1497)
DNA (144bp) protein (48aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Clostridiales RepID=G9RSH7_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EHL71572.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Excisionase from transposon Tn916.
L1_008_000M1_scaffold_59_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2152..2406
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27188.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_59_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2698..3627
DNA (930bp) protein (310aa)
Putative replication protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZP8_9FIRM
Putative replication protein {ECO:0000313|EMBL:CDB27189.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative replication protein
L1_008_000M1_scaffold_59_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3640..3834
DNA (195bp) protein (65aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRX3_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:CDB27190.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_59_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3871..5022
DNA (1152bp) protein (384aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H130_9FIRM
Putative site-specific recombinase {ECO:0000313|EMBL:CDB27191.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative site-specific recombinase
L1_008_000M1_scaffold_59_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5273..6610)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27192.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_59_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6607..7050)
DNA (444bp) protein (148aa)
Transcriptional regulator MarR family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP14_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDB27193.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
marR; MarR family transcriptional regulator
L1_008_000M1_scaffold_59_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7392..7841
DNA (450bp) protein (150aa)
Putative MarR family transcriptional regulator n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZQ2_9FIRM
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:CDB27194.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative MarR family transcriptional regulator
L1_008_000M1_scaffold_59_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7838..9574
DNA (1737bp) protein (579aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRX8_9FIRM
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDB27195.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ABC transporter permease/ATP-binding protein
L1_008_000M1_scaffold_59_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9567..11447
DNA (1881bp) protein (627aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H135_9FIRM
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDB27196.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ABC transporter permease/ATP-binding protein
L1_008_000M1_scaffold_59_13
unknown

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comp(11546..12754)
DNA (1209bp) protein (403aa)

This feature has no annotations

L1_008_000M1_scaffold_59_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13074..13625)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27197.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative metal-binding protein
L1_008_000M1_scaffold_59_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13622..16492)
DNA (2871bp) protein (957aa)
Peptidase M56 family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP19_9FIRM
Peptidase M56 family protein {ECO:0000313|EMBL:CDB27198.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
peptidase M56 family protein
L1_008_000M1_scaffold_59_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16495..16860)
DNA (366bp) protein (122aa)
Penicillinase repressor n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZQ6_9FIRM
Penicillinase repressor {ECO:0000313|EMBL:CDB27199.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted transcriptional regulator
L1_008_000M1_scaffold_59_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17192..17788
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27200.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_59_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17790..18962
DNA (1173bp) protein (391aa)
Putative cation efflux protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H140_9FIRM
Putative cation efflux protein {ECO:0000313|EMBL:CDB27201.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative cation efflux protein
L1_008_000M1_scaffold_59_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19056..19817)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27202.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_59_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19819..20433)
DNA (615bp) protein (205aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP23_9FIRM
L1_008_000M1_scaffold_59_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20632..21408
DNA (777bp) protein (259aa)
Bacterial group 2 Ig-like protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZR0_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CDB27204.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_59_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(21568..22347)
DNA (780bp) protein (260aa)
Polysaccharide deacetylase family sporulation protein PdaB n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFW3_9FIRM
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:CCX74801.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_59_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22466..23260)
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGH5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB25092.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type uncharacterized transport system, ATPase component
L1_008_000M1_scaffold_59_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23253..24167)
DNA (915bp) protein (305aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV03_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDB25091.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type uncharacterized transport system, permease component
L1_008_000M1_scaffold_59_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24296..24841)
DNA (546bp) protein (182aa)
Tat pathway signal sequence domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKX4_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDB25090.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type uncharacterized transport system, periplasmic component
L1_008_000M1_scaffold_59_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24927..25058)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GI27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25088.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_59_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25463..25672
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25087.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_59_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25785..26963
DNA (1179bp) protein (393aa)
Extracellular ligand-binding receptor n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKX1_9FIRM
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDB25085.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L1_008_000M1_scaffold_59_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27057..27935
DNA (879bp) protein (293aa)
ABC-type transporter integral membrane subunit n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGG9_9FIRM
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CDB25082.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC transporter permease
L1_008_000M1_scaffold_59_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27946..28941
DNA (996bp) protein (332aa)
High-affinity branched-chain amino acid transport protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUZ4_9FIRM
High-affinity branched-chain amino acid transport protein {ECO:0000313|EMBL:CDB25081.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC transporter permease
Displaying items 1-30 of 167 in total

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