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L1_008_000M1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_342_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
Putative transposase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KVR7_OSCVS
putative transposase
Putative transposase {ECO:0000313|EMBL:BAL00700.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_342_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1044..1304
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40842.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_008_000M1_scaffold_342_3
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1442..3094
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26698.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
site-specific recombinase
L1_008_000M1_scaffold_342_4
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3094..4794
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MQJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73359.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
cassette chromosome recombinase B
L1_008_000M1_scaffold_342_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4784..6391
DNA (1608bp) protein (536aa)
Recombinase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5APP6_9CLOT
Recombinase {ECO:0000313|EMBL:CCX41166.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
recombinase
L1_008_000M1_scaffold_342_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6454..6582
DNA (129bp) protein (43aa)
Stage V sporulation protein AC n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMV8_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CDB25770.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
stage V sporulation protein AC
L1_008_000M1_scaffold_342_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6654..6863)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25771.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_342_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7007..7228)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25774.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_342_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7393..7899
DNA (507bp) protein (169aa)
Acetyltransferase GNAT family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWX3_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDB25776.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
acetyltransferase, GNAT family
L1_008_000M1_scaffold_342_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7941..8513
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25778.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_342_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8541..10040
DNA (1500bp) protein (500aa)
Zn-dependent carboxypeptidase (EC:3.4.17.19)
Zn-dependent carboxypeptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMW5_9FIRM
Zn-dependent carboxypeptidase {ECO:0000313|EMBL:CDB25780.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_342_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10164..10652)
DNA (489bp) protein (163aa)
IAA acetyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIF7_9FIRM
IAA acetyltransferase {ECO:0000313|EMBL:CDB25782.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000M1_scaffold_342_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10718..11164)
DNA (447bp) protein (149aa)
S1 RNA binding domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMW9_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CDB25785.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_342_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11202..11501)
DNA (300bp) protein (100aa)
Putative cell division protein FtsL n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIG2_9FIRM
Putative cell division protein FtsL {ECO:0000313|EMBL:CDB25787.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
septum formation initiator family protein
L1_008_000M1_scaffold_342_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11993..12271)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25790.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_342_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12361..12624)
DNA (264bp) protein (88aa)
S4 RNA-binding domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWY8_9FIRM
S4 RNA-binding domain protein {ECO:0000313|EMBL:CDB25791.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_342_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12790..14175
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJW5_9FIRM
L1_008_000M1_scaffold_342_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14339..14944)
DNA (606bp) protein (202aa)
DegV family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMX5_9FIRM
DegV family protein {ECO:0000313|EMBL:CDB25795.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
DegV family protein
L1_008_000M1_scaffold_342_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15083..15763
DNA (681bp) protein (227aa)
Lipase/acylhydrolase putative n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWZ3_9FIRM
Lipase/acylhydrolase putative {ECO:0000313|EMBL:CDB25796.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
lipase/acylhydrolase
L1_008_000M1_scaffold_342_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15802..16650
DNA (849bp) protein (283aa)
DegV family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIH7_9FIRM
DegV family protein {ECO:0000313|EMBL:CDB25802.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
degV family protein
L1_008_000M1_scaffold_342_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16746..17768
DNA (1023bp) protein (341aa)
Stage V sporulation protein AD n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX12_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDB25816.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
spoVAD; stage V sporulation protein AD
L1_008_000M1_scaffold_342_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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17772..18128
DNA (357bp) protein (119aa)
Putative stage V sporulation protein AE n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJY4_9FIRM
Putative stage V sporulation protein AE {ECO:0000313|EMBL:CDB25818.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
spoVAE; putative stage V sporulation protein AE
L1_008_000M1_scaffold_342_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(18208..19380)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72424.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
basic membrane lipoprotein
L1_008_000M1_scaffold_342_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19495..20214)
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJY7_9FIRM
L1_008_000M1_scaffold_342_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20241..20906)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GN04_9FIRM
L1_008_000M1_scaffold_342_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21114..22976)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GN09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25830.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_342_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23152..23514
DNA (363bp) protein (121aa)
Putative GntR family transcriptional regulator n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIK9_9FIRM
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:CDB25832.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative GntR family transcriptional regulator
L1_008_000M1_scaffold_342_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23516..24217
DNA (702bp) protein (234aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVS8_9FIRM
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB25834.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ABC transporter ATP-binding protein
L1_008_000M1_scaffold_342_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24207..25010
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25836.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_342_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25192..26247
DNA (1056bp) protein (352aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GK02_9FIRM
Displaying items 1-30 of 79 in total

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