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L1_008_000M1_scaffold_1775_4

Organism: dasL1_008_000M1_concoct_63_sub_fa

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1893..2750

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLQ5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 180.0
  • Bit_score: 147
  • Evalue 1.40e-32
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDB26403.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 180.0
  • Bit_score: 147
  • Evalue 2.00e-32
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 183.0
  • Bit_score: 115
  • Evalue 1.30e-23

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Taxonomy

Oscillibacter sp. CAG:241 → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 858
ATGATTCCCATCTGCATTCAGACCATAGAGAATGATGATGACCGAGACTTTATGGAGTGGCTGTTTTTGGAATACCACCCACTCATGTACGCAACTATCCGGAAGGTCATACATGACCAATGGACGTGCGAGGATGTGCTGCAGGAGTCTGTCAGAAAATTCATCGACCATATTCCCCAGCTGCGGGAGATGGACGCAGCCTCCCGCACCAACTACATCGTTGTGGCGTGCCGGCATAATGCCATCGAGGAGGAAAAGCGTCAGCGCAGGGCCCCCTTCCCTGTGGGGAATGGGGTGATTGACATTGCCTCCCGGGATGCAGAGAATCCGGAACGGCAGATCCTGCTTTTGGACGATGCCGATGTGCTTTGGCGTGTATGGCCGCAGCTGGATTCGCGGACGCGGCAGCTGCTGGAGGACAAATATGTCCTGAATATGAGCGATGCGGAGATTGCCTCTGCCTTGGGCGTCAAGCCCAGCAGTGTGCGGATGCTGCTGACAAGGGCCAGGAGCAAGGCGCGTAAGGCGATAGAGAGGTGTAGTTGGCGGAGATGGCACCCTCCGTCGCCTTGGTCAGCCGGTTGTTCTTGTCATAGGTATAGGTGCTACTTGCTGTCCGGACGTGGCCGTCTTTTAACGGCCACGTCCGTCAGCCGGGACGATTATTCACTCTGGTCGGGTTCCTGGTTCTTAATTGCTGTCCCAAGGCATGAAAATCATGCACGTCAAGATCACCAGGAAAAAGATTCCAACAAGGCATGCCCCTACTATGCCCGTTCTTGCGTCCTTTTTCTTTCCGCCTTTACGACAAACATGGACGATAGAAAGCGTGAGGAGCTCAGCGCCGCCTCCACCTAA
PROTEIN sequence
Length: 286
MIPICIQTIENDDDRDFMEWLFLEYHPLMYATIRKVIHDQWTCEDVLQESVRKFIDHIPQLREMDAASRTNYIVVACRHNAIEEEKRQRRAPFPVGNGVIDIASRDAENPERQILLLDDADVLWRVWPQLDSRTRQLLEDKYVLNMSDAEIASALGVKPSSVRMLLTRARSKARKAIERCSWRRWHPPSPWSAGCSCHRYRCYLLSGRGRLLTATSVSRDDYSLWSGSWFLIAVPRHENHARQDHQEKDSNKACPYYARSCVLFLSAFTTNMDDRKREELSAAST*