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L1_008_000M1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_65_1

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2..151
DNA (150bp) protein (50aa)
2-hydroxyglutaryl-CoA dehydratase activator HgdC n=3 Tax=root RepID=R5B1B0_9FIRM
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EKC57594.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hgdC; 2-hydroxyglutaryl-CoA dehydratase subunit C
L1_008_000M1_scaffold_65_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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391..2523
DNA (2133bp) protein (711aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hppA; pyrophosphate-energized inorganic pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=2 Tax=root RepID=R5B0U1_9FIRM
L1_008_000M1_scaffold_65_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(2577..3800)
DNA (1224bp) protein (408aa)
Methyltransferase small n=2 Tax=root RepID=R5B558_9FIRM
Methyltransferase small {ECO:0000313|EMBL:CCX46591.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
methyltransferase small
L1_008_000M1_scaffold_65_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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3936..5042
DNA (1107bp) protein (369aa)
Capsule synthesis protein CapA n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATB9_9FIRM
Capsule synthesis protein CapA {ECO:0000313|EMBL:CCX46590.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L1_008_000M1_scaffold_65_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(5098..5832)
DNA (735bp) protein (245aa)
Putative Xre family DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXC3_9FIRM
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CCX46589.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative Xre family DNA-binding protein
L1_008_000M1_scaffold_65_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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6036..7223
DNA (1188bp) protein (396aa)
Aminotransferase class I/II n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUE2_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CCX46588.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
amino acid aminotransferase
L1_008_000M1_scaffold_65_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(7274..8101)
DNA (828bp) protein (276aa)
Cof-like hydrolase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0T5_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCX46587.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_65_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(8505..9200)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B555_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46586.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative metalloendopeptidase
L1_008_000M1_scaffold_65_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(9280..10572)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
enolase (EC:4.2.1.11)
Enolase n=2 Tax=root RepID=R5ATB4_9FIRM
L1_008_000M1_scaffold_65_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(10585..12108)
DNA (1524bp) protein (508aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXB9_9FIRM
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
L1_008_000M1_scaffold_65_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(12105..12887)
DNA (783bp) protein (261aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUD8_9FIRM
L1_008_000M1_scaffold_65_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(12911..14104)
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0T1_9FIRM
L1_008_000M1_scaffold_65_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(14153..14629)
DNA (477bp) protein (159aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B550_9FIRM
putative RNA methyltransferase
L1_008_000M1_scaffold_65_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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14853..15737
DNA (885bp) protein (295aa)
Radical SAM domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATA9_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCX46580.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
radical SAM domain protein
L1_008_000M1_scaffold_65_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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15783..16802
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46579.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L1_008_000M1_scaffold_65_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(16861..18123)
DNA (1263bp) protein (421aa)
lysA; putative diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUD5_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCX46578.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_65_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(18274..19284)
DNA (1011bp) protein (337aa)
Transglutaminase-like superfamily n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0S7_9FIRM
Transglutaminase-like superfamily {ECO:0000313|EMBL:CCX46577.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Transglutaminase-like superfamily.
L1_008_000M1_scaffold_65_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(19288..20142)
DNA (855bp) protein (285aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B546_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCX46576.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
AraC family transcriptional regulator
L1_008_000M1_scaffold_65_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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20275..21549
DNA (1275bp) protein (425aa)
Na+/H+-dicarboxylate symporters n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATA4_9FIRM
Na+/H+-dicarboxylate symporters {ECO:0000313|EMBL:CCX46575.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Na+/H+-dicarboxylate symporters
L1_008_000M1_scaffold_65_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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21616..22398
DNA (783bp) protein (261aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXB2_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative RNA polymerase sigma factor
L1_008_000M1_scaffold_65_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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22450..22731
DNA (282bp) protein (94aa)
Sporulation protein YlmC/YmxH family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUD0_9FIRM
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CCX46573.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_65_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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22908..23642
DNA (735bp) protein (245aa)
30S ribosomal protein S2 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0S2_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsB; 30S ribosomal protein S2
L1_008_000M1_scaffold_65_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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23708..24619
DNA (912bp) protein (304aa)
Elongation factor Ts n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B542_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
tsf; elongation factor Ts
L1_008_000M1_scaffold_65_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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24895..25755
DNA (861bp) protein (287aa)
EDD domain protein DegV family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT98_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCX46570.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_65_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(25789..25974)
DNA (186bp) protein (62aa)
Protein containing DUF951 bacterial n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXA7_9FIRM
Protein containing DUF951 bacterial {ECO:0000313|EMBL:CCX46569.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_65_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(25978..27240)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46568.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_65_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

27325..27993
DNA (669bp) protein (223aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0R7_9FIRM
L1_008_000M1_scaffold_65_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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27990..28667
DNA (678bp) protein (226aa)
Paral putative regulator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B537_9FIRM
Paral putative regulator {ECO:0000313|EMBL:CCX46566.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
methyltransferase, YaeB/AF_0241 family
L1_008_000M1_scaffold_65_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(28670..29494)
DNA (825bp) protein (275aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUS8_9FIRM
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CCX45719.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L1_008_000M1_scaffold_65_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(29552..29812)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B2P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45721.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Displaying items 1-30 of 154 in total

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