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L1_008_000M1_scaffold_163

Search features with annotation key words

Displaying items 31-60 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_163_31
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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31326..32630
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AV10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45814.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_163_32
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(32804..33058)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AS61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45813.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_163_33
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(33284..33655)
DNA (372bp) protein (124aa)
Putative endoribonuclease L-PSP n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYG4_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CCX45812.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
endoribonuclease L-PSP
L1_008_000M1_scaffold_163_34
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(33671..34879)
DNA (1209bp) protein (403aa)
threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B2X3_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:CCX45811.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_163_35
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

35178..35891
DNA (714bp) protein (238aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQZ2_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX45810.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_163_36
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

35885..37483
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AV05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45809.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_163_37
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37547..38056)
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Ferritin-like protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9U7_RUMC1
Ferritin-like protein
L1_008_000M1_scaffold_163_38
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

38216..39238
DNA (1023bp) protein (341aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYS7_9FIRM
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:CCX47079.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative oxidoreductase
L1_008_000M1_scaffold_163_39
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(39342..39506)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47080.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_163_40
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(39522..41102)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B6J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47081.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L1_008_000M1_scaffold_163_41
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(41099..42295)
DNA (1197bp) protein (399aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B291_9FIRM
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB {ECO:0000313|EMBL:CCX47082.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L1_008_000M1_scaffold_163_42
unknown

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comp(42433..42570)
DNA (138bp) protein (46aa)

This feature has no annotations

L1_008_000M1_scaffold_163_43
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(42609..43937)
DNA (1329bp) protein (443aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVS2_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
sodium- and chloride-dependent transporter, tyrosine transporter
L1_008_000M1_scaffold_163_44
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44143..45231)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I964_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41971.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L1_008_000M1_scaffold_163_45
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(45361..46590)
DNA (1230bp) protein (410aa)
Serine/threonine transporter SstT n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYT0_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Na+/serine symporter
L1_008_000M1_scaffold_163_46
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(46799..46954)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47085.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_163_47
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(46967..48535)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=2 Tax=root RepID=R5B6K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47086.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hgdA1; 2-hydroxyglutaryl-CoA dehydratase subunit D
L1_008_000M1_scaffold_163_48
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(48537..49742)
DNA (1206bp) protein (402aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B296_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:CCX47087.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L1_008_000M1_scaffold_163_49
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(49854..50486)
DNA (633bp) protein (211aa)
Transcriptional regulator TetR family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVS5_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCX47088.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_163_50
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(50772..51221)
DNA (450bp) protein (150aa)
Large-conductance mechanosensitive channel n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B2B0_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
mscL; large conductance mechanosensitive channel protein
L1_008_000M1_scaffold_163_51
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(51252..52556)
DNA (1305bp) protein (435aa)
Seryl-tRNA synthetase n=2 Tax=root RepID=R5AYU5_9FIRM
Seryl-tRNA synthetase {ECO:0000313|EMBL:CCX47104.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
serS; seryl-tRNA synthetase
L1_008_000M1_scaffold_163_52
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(52586..53470)
DNA (885bp) protein (295aa)
Stage 0 sporulation protein J n=2 Tax=root RepID=R5B6M4_9FIRM
Stage 0 sporulation protein J {ECO:0000313|EMBL:CCX47106.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
parB; chromosome partitioning protein ParB
L1_008_000M1_scaffold_163_53
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(53463..54260)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47108.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
parA; chromosome partitioning protein ParA
L1_008_000M1_scaffold_163_54
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(54407..55264)
DNA (858bp) protein (286aa)
gpr; putative germination protease (EC:3.4.24.78)
Germination protease n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUV2_9FIRM
Germination protease {ECO:0000313|EMBL:CCX47110.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_163_55
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


55452..55715
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B2B9_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsT; 30S ribosomal protein S20
L1_008_000M1_scaffold_163_56
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

55782..56669
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47114.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L1_008_000M1_scaffold_163_57
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

56809..58203
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWY2_9FIRM
L1_008_000M1_scaffold_163_58
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(58308..58649)
DNA (342bp) protein (114aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVX9_9FIRM
Hydrogenase expression/synthesis HypA {ECO:0000313|EMBL:CCX47148.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L1_008_000M1_scaffold_163_59
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(58649..61333)
DNA (2685bp) protein (895aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYX8_9FIRM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCX47149.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L1_008_000M1_scaffold_163_60
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(61511..61777)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47150.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Displaying items 31-60 of 91 in total

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