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L1_008_000M1_scaffold_409

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_409_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(726..1280)
DNA (555bp) protein (185aa)
sfp; putative 4'-phosphopantetheinyl transferase sfp (EC:2.7.8.-)
4'-phosphopantetheinyl transferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYR5_9FIRM
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:CCX47064.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_409_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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1366..2145
DNA (780bp) protein (260aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVQ5_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CCX47063.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
OmpR family two-component response regulator
L1_008_000M1_scaffold_409_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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2150..3217
DNA (1068bp) protein (356aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUR7_9FIRM
L1_008_000M1_scaffold_409_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

3250..4227
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=root RepID=R5AVQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47058.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

4258..5112
DNA (855bp) protein (285aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=2 Tax=root RepID=R5B6H4_9FIRM
L1_008_000M1_scaffold_409_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


5132..6238
DNA (1107bp) protein (369aa)
Protein RecA n=2 Tax=root RepID=R5AYQ8_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
recA; RecA protein
L1_008_000M1_scaffold_409_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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6238..6855
DNA (618bp) protein (206aa)
Regulatory protein RecX n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B264_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
recX; regulatory protein RecX
L1_008_000M1_scaffold_409_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

6859..8181
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUR1_9FIRM
hypothetical protein
L1_008_000M1_scaffold_409_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

8191..8715
DNA (525bp) protein (175aa)
pgsA; phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVP4_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCX47048.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_409_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(8886..9413)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=root RepID=R5B260_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47047.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Sporulation and spore germination.
L1_008_000M1_scaffold_409_11
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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9777..11186
DNA (1410bp) protein (470aa)
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEQ6_9FIRM
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_409_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(11324..15013)
DNA (3690bp) protein (1230aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47045.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15000..17498)
DNA (2499bp) protein (833aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47044.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(17920..18792)
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B245_9FIRM
hypothetical protein
L1_008_000M1_scaffold_409_15

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comp(18870..19094)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=root RepID=R5AUP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKC61155.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_409_16
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19174..19611)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJS5_9CLOT
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:KJJ73290.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_409_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

19931..20500
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47004.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_409_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(20305..21198)
DNA (894bp) protein (298aa)
33 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B228_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hslO; 33 kDa chaperonin
L1_008_000M1_scaffold_409_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(21269..22018)
DNA (750bp) protein (250aa)
Methyltransferase UbiE/COQ5 family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B6D0_9FIRM
Methyltransferase UbiE/COQ5 family {ECO:0000313|EMBL:CCX47001.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Methyltransferase domain.
L1_008_000M1_scaffold_409_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(22015..22332)
DNA (318bp) protein (106aa)
TrpR family protein YerC/YecD n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUL3_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CCX47000.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_21

Not on your lists

22547..23020
DNA (474bp) protein (158aa)
Nodulation efficiency, NfeD n=1 Tax=human gut metagenome RepID=K1TSV5_9ZZZZ
Nodulation efficiency, NfeD {ECO:0000313|EMBL:EKC69280.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Membrane protein implicated in regulation of membrane protease activity
L1_008_000M1_scaffold_409_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

23033..23932
DNA (900bp) protein (300aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AS37_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CCX46200.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

24007..25422
DNA (1416bp) protein (472aa)
hexokinase (EC:2.7.1.1)
Hexokinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0W2_9FIRM
Hexokinase {ECO:0000313|EMBL:CCX46617.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_409_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(25411..25794)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46619.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(25970..27013)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46620.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Family S9 peptidase
L1_008_000M1_scaffold_409_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(27010..27735)
DNA (726bp) protein (242aa)
ThiF family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B587_9FIRM
ThiF family protein {ECO:0000313|EMBL:CCX46621.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_409_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(27732..27893)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47553.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_409_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(28171..29742)
DNA (1572bp) protein (524aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
PPIC-type PPIASE domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B053_9FIRM
putative isomerase
L1_008_000M1_scaffold_409_29
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30730..31191)
DNA (462bp) protein (154aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Roseburia sp. CAG:50 RepID=R5U9G0_9FIRM
L1_008_000M1_scaffold_409_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

31387..33156
DNA (1770bp) protein (590aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
pckG; Phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B673_9FIRM
Displaying items 1-30 of 50 in total

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