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L1_008_000M1_scaffold_163_24

Organism: dasL1_008_000M1_concoct_70_fa

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 23375..26893

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1172.0
  • Bit_score: 2298
  • Evalue 0.0
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 1149.0
  • Bit_score: 1216
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=root RepID=R5AR03_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1172.0
  • Bit_score: 2298
  • Evalue 0.0

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Taxonomy

Firmicutes bacterium CAG:103 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3519
TTGTTCCTGGTCGCGCAGGCCGAACAACTGTTCGGCGATACGGAAGCAGCCGCCCTCCCGGCCTTGTTGGAGAGTGGGCGGCTTCCTGCGCGCATTTCGGGTCTGCCGGCGAGTGCGCGCGCGCTGCTGGCGGCGTCGATGCACGCGCAGCTCGACGCGCCGGTGCTGGCCGTGTGCCCGGACGAGGCGGCGGCCGAGCTGTTTCAAAAAGATCTCTCTGCCCTGCTGGGGCAGGACGTGCCGCTGCTGACGGCGCGCGACTATACGTTTTATACGGTCGAGAGCGTCTCGCGTCAGACGGAGCAAAAGCGCCTGAGCGCGCTTTATGCGCTCGCTGCCGGGACGGCGCCGGCCGTGGTGTGCACGGTTTCGGGTCTGCTGCAGCGTGCCATGCCGAAGGAAAAACTGCTGCAGGCGGCCTTTGAGATCCGCGACGGCAGTTCCCTGCCGCCCGAGGATGCCGAGGATGCGCTGCTGCGCTGCGGCTATCTGCGTACGGCGCAGGTGGAAGGGCCGGGCCAGTTTTCGCGCCGCGGCGGCATTCTGGACTTTTTCTCCCCCGCGTATCCGCAGCCGGTGCGCGTGGAGTTCTGGGGCGACGATGTGGACTCCATGGGCTTTTTCGACCCCGAGAGTCAGCGGCGCACTCAGCCGCTGGAAAGCTGCCGCATCCTGCCGGCGGCGGAGACCCTGCCGCCGCTGTATCCGGGCGGCAGCGCCGCACTGGGCGAAAAGCTGCAGAAGCTCGCCGGACGCGCCGCCGCGAAAAAGGACAGCGACACGGCACAGAAGCTCGCCGAGGCCCTGCGCGCCGACGGGGAAAAGCTCTGCGCCGACTGCGTGCTCCCGGCGGCGGACCGGTATATGGGCTTCGTGTACGACACGTTTGCTACGGCGCTGGACTATCTCGCGCCGGAGGCGGCCGTGCTGATCGACCAGCCGGCGCGCTGCGCCGAGCGCGCGAAGGAATACACCACGCAGCTGCGCGAGGACATCGCCCTGCTCGTGCGCAGCGGCACGATGGCCGCGCGCGCGGAAAATTTCTACGAGCCGTTTGCCGACATGATGCGCAGAGTCCAGGCCTGGCCCATCGTGCTGGCCGACGGGCTGCAGCTCGGCCGCAGCCCCATCGAGGCGCGCACGCTCGTGAGCCTGACGGCAAAGCAGCTGCCCTCTTACGGCGGCAGCAGCCAGACCGCGGCGGACGACATTGCGCACTATCGGAATCTCGGCTACCGCGTGGTCGTGCTGGCGGGCGATATGCGCCGGGCGCGCATTTTGTGCGAGTTTCTCGACGGTCACGGCATCCATGCCGCGGCGGACGAGCACCCGGATGCGCTGCCGGAACCGGGGCAGTGCCTCGTCACGCCGGGCAGTCTCTCGGCGGGCATCGAGTTTCCGTATGCAAGGCTCGCCATCCTCACGGACACGCAGATCGCGGCGTCCGGCCTGCGGCGCGCCAGACACAAAAAGCAAACGAACCGCGAGAAGATCAACTCCTACACCGACCTCTCCGTTGGCGACCTCGTCGTGCACGAATATCACGGCATCGGCCGCTTTGCGGGCATCGTGCAGATGCCGGTCGACGGTGCGGTGAAGGACTATATCAAGATCAGCTATGCCGGGGCGGACACGCTCTATGTCCCGGCGACGCAGCTCGACCTCGTGAGCAAATACATCGGCGCGGGCGAGGACCGGCCCGTAAAGCTGTCCAAAATGGGCGGCACGGAGTGGGCGCGCACGAAAACGCGCGCCAAAGCGGCCGCAAAAAGCATGGCCAAAGAGCTCACGGCGCTCTACGCTGCGCGCAGCCGCACGAAGGGTCACGCCTTCGCACCCGACAGCCCGTGGCAGACGGAATTTGAGGAGCACTTCGGCTATCCGGAGACGGACGACCAGCTCCGGTGCATCGACGAGATCAAGGCCGACATGGAAAAGCCCGTGCCCATGGATCGTCTCCTGTGCGGCGACGTGGGCTACGGCAAGACCGAGGTCGCCCTGCGCGCGGTGATGAAGTGCGTGCTCGACGGGCGGCAGGCGGCCATTCTCGTGCCGACGACCGTACTCGCCCAGCAGCACTATCAGACGGCCGTGCAGCGGTTTTACGGCTTCCCGGTCGAGATCCGGATGCTCTCGCGCTTTTGCTCGCAGGGGCAGATCCGCCAGACGCTCGCGGACATGCGCAGCGGCAAGTGCGATCTCGTGATCGGCACGCATAAGCTGCTGCAGAAAAACATCGAATTCAAGAACCTCGGCCTGCTCATCGTCGACGAGGAGCAGCGCTTCGGCGTGGCGCACAAGGAGCACATCAAGGAGATGAGCCGCGCGGTCGATGTGCTCACGCTCTCGGCCACACCCATCCCGCGCACGCTGAATATGGCCCTGTCCGGCATCCGCGACATGTCCACCATCGAAGAGCCGCCGCAGGACCGCATCCCCGTGCAGACCTTCGTCATGGAGCACGACTGGAACGTGCTGTGCGACGCCATGCGCCGCGAACTGCAGCGCGGCGGGCAGGTGTACTACCTGCACAACCGCATTGAAAACATCGAGCGCACCGCCCTGCGCATCTCGAAGATGCTCGACGGCGCGGTCGTCGACGTGGCGCACGGCCAGATGAACGAGGAGCAGCTCTCGACGGTCATGGAGCGCATGGTCACGGGCGAGACGCAGATCCTGGTTTGCACGACCATCATCGAGACCGGCATCGACATTCCGAACGTGAACACCCTCATCATCGAGGACGCCGACCGCATGGGCCTTGCCCAGCTGCACCAGCTGCGCGGGCGCGTGGGCCGCTCGAACCGGCGCGCGAGCGCGTACCTGACATTCCGGCGCGGGCGCGAGCTGAGCGAGATCGCCGAAAAGCGCCTGAGCGCCATCCGCGAGTTTGCGGAGTTCAACTCCGGCTTCCGCATCGCCATGCGAGATCTGGAGATCCGCGGCGCGGGCAGTCTGCTCGGGGCCGAGCAGTCGGGCCATATGATCGACGTCGGTTATGATATGTACCTCAAGCTGCTCGAGGAGGCCGTGCTCGAAGAGCGCGGCGAAAAGCCCGAGCAGCGCGCCGAGTGCGCGGCCGACCTCGCCGTGTCGGCCAACATCCCGGAGAGCTATGTGCCCAGCCAGGAGCAGCGCATGGATCTCTACCGCCGCATCGCGCTCGTGCGCACGGAGGCGGAGGCCGACGACCTCATGGACGAGGTCATCGACCGCTTCGGCGACCCGCCGCCGAGCGTGTACACGCTCGTGCAGGTGGCGCTGCTGCGTGCCGACGCGGGCAAGGTCGGCGTGACGGACATTTCGCAGAAAAACGGCTGTTTGAAGTTTCTGCTGGCGCAGTTCGATATGCAGAAGGTATCGGCACTGTACGCCCGGCCGGAGTTCAAGGGCCGCTTGAAGGTGGATGCGGGGGCAAAGCCGGGCGTCATTCTGCGCCTCAAGACCCGCACCCACGTCATCGAACAGGCAAGAGCGTTTGTTTCCGCATGGGCAGACGCCCAGGGAGACCGCGCATGA
PROTEIN sequence
Length: 1173
LFLVAQAEQLFGDTEAAALPALLESGRLPARISGLPASARALLAASMHAQLDAPVLAVCPDEAAAELFQKDLSALLGQDVPLLTARDYTFYTVESVSRQTEQKRLSALYALAAGTAPAVVCTVSGLLQRAMPKEKLLQAAFEIRDGSSLPPEDAEDALLRCGYLRTAQVEGPGQFSRRGGILDFFSPAYPQPVRVEFWGDDVDSMGFFDPESQRRTQPLESCRILPAAETLPPLYPGGSAALGEKLQKLAGRAAAKKDSDTAQKLAEALRADGEKLCADCVLPAADRYMGFVYDTFATALDYLAPEAAVLIDQPARCAERAKEYTTQLREDIALLVRSGTMAARAENFYEPFADMMRRVQAWPIVLADGLQLGRSPIEARTLVSLTAKQLPSYGGSSQTAADDIAHYRNLGYRVVVLAGDMRRARILCEFLDGHGIHAAADEHPDALPEPGQCLVTPGSLSAGIEFPYARLAILTDTQIAASGLRRARHKKQTNREKINSYTDLSVGDLVVHEYHGIGRFAGIVQMPVDGAVKDYIKISYAGADTLYVPATQLDLVSKYIGAGEDRPVKLSKMGGTEWARTKTRAKAAAKSMAKELTALYAARSRTKGHAFAPDSPWQTEFEEHFGYPETDDQLRCIDEIKADMEKPVPMDRLLCGDVGYGKTEVALRAVMKCVLDGRQAAILVPTTVLAQQHYQTAVQRFYGFPVEIRMLSRFCSQGQIRQTLADMRSGKCDLVIGTHKLLQKNIEFKNLGLLIVDEEQRFGVAHKEHIKEMSRAVDVLTLSATPIPRTLNMALSGIRDMSTIEEPPQDRIPVQTFVMEHDWNVLCDAMRRELQRGGQVYYLHNRIENIERTALRISKMLDGAVVDVAHGQMNEEQLSTVMERMVTGETQILVCTTIIETGIDIPNVNTLIIEDADRMGLAQLHQLRGRVGRSNRRASAYLTFRRGRELSEIAEKRLSAIREFAEFNSGFRIAMRDLEIRGAGSLLGAEQSGHMIDVGYDMYLKLLEEAVLEERGEKPEQRAECAADLAVSANIPESYVPSQEQRMDLYRRIALVRTEAEADDLMDEVIDRFGDPPPSVYTLVQVALLRADAGKVGVTDISQKNGCLKFLLAQFDMQKVSALYARPEFKGRLKVDAGAKPGVILRLKTRTHVIEQARAFVSAWADAQGDRA*