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L1_008_000M1_scaffold_1467

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1467_1
Clostridium sp. CAG:1193, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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274..762
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1193 RepID=R5J7R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY45051.1}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;"
GtcA family membrane protein
L1_008_000M1_scaffold_1467_2
unknown

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823..1875
DNA (1053bp) protein (351aa)

This feature has no annotations

L1_008_000M1_scaffold_1467_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2009..2218
DNA (210bp) protein (70aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIT8_9FIRM
putative tautomerase
L1_008_000M1_scaffold_1467_4
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2263..2862
DNA (600bp) protein (200aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D6Q9_DESAJ
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AFM41483.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
L1_008_000M1_scaffold_1467_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2875..3369
DNA (495bp) protein (165aa)
MutT/NUDIX family protein {ECO:0000313|EMBL:ACD22000.1}; Nudix dNTPase DR1776 {ECO:0000313|EMBL:CDH91579.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDH91579.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
MutT/NUDIX family protein n=2 Tax=Clostridium botulinum B RepID=B2TNQ4_CLOBB
MutT/nudix family protein
L1_008_000M1_scaffold_1467_6
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3836..6553
DNA (2718bp) protein (906aa)
Pectinesterase n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q6L4_CALOW
pectinesterase
Pectinesterase {ECO:0000313|EMBL:ADQ05621.1}; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
L1_008_000M1_scaffold_1467_7
Streptococcus sp. oral taxon 056, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(6700..7299)
DNA (600bp) protein (200aa)
Uncharacterized protein n=12 Tax=Clostridium difficile RepID=T2TP93_CLODI
Putative uncharacterized protein {ECO:0000313|EMBL:EGP66562.1}; TaxID=904294 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. oral taxon 056 str. F0418.;"
conserved hypothetical protein
L1_008_000M1_scaffold_1467_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7321..9309)
DNA (1989bp) protein (663aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
fbp; fructose-1,6-bisphosphatase class 3 1 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EF75_CLOPA
L1_008_000M1_scaffold_1467_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9386..10072)
DNA (687bp) protein (229aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N7A0_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1467_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10084..11463)
DNA (1380bp) protein (460aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3B9_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L1_008_000M1_scaffold_1467_11
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(11465..13231)
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YGD1_9FIRM
L1_008_000M1_scaffold_1467_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13256..13576)
DNA (321bp) protein (107aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase, subunit F n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAB7_9CLOT
ATP synthase, subunit F {ECO:0000313|EMBL:EEG51749.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L1_008_000M1_scaffold_1467_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(13569..14537)
DNA (969bp) protein (323aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase subunit id=3086159 bin=GWF2_Clostridiales_36_10 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L1_008_000M1_scaffold_1467_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(14558..15151)
DNA (594bp) protein (198aa)
V-type proton ATPase subunit E n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WID0_9FIRM
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
archaeal/vacuolar-type H+-ATPase subunit E
L1_008_000M1_scaffold_1467_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15180..15662)
DNA (483bp) protein (161aa)
ATP synthase subunit C n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAC0_9CLOT
ATP synthase subunit C {ECO:0000313|EMBL:EEG51752.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
V-type ATP synthase subunit K
L1_008_000M1_scaffold_1467_16
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15665..17701)
DNA (2037bp) protein (679aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase subunit family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2D9B9_CLOS4
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L1_008_000M1_scaffold_1467_17
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(17732..18040)
DNA (309bp) protein (103aa)
ATP synthase H subunit n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REZ0_ARCPA
ATP synthase H subunit
ATP synthase H subunit {ECO:0000313|EMBL:ADB58684.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
L1_008_000M1_scaffold_1467_18
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18387..18647
DNA (261bp) protein (87aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Clostridium sp. CAG:127 RepID=R5P5T6_9CLOT
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CCZ09679.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
sporulation transcriptional regulator SpoIIID
L1_008_000M1_scaffold_1467_19
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18890..20245
DNA (1356bp) protein (452aa)
Citrate synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNV0_9CLOT
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CDM67588.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_008_000M1_scaffold_1467_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20910..22730)
DNA (1821bp) protein (607aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KF55_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ97146.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
peptidase
Displaying 20 items

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