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L1_008_000M1_scaffold_1525

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1525_1
unknown

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comp(1000..1164)
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000M1_scaffold_1525_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(1376..2602)
DNA (1227bp) protein (409aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Phosphofructokinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHJ8_9FIRM
phosphofructokinase
L1_008_000M1_scaffold_1525_3
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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3008..3184
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C0V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD71402.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L1_008_000M1_scaffold_1525_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3338..5101)
DNA (1764bp) protein (588aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Threonine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II00_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1525_5
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5460..6875)
DNA (1416bp) protein (472aa)
Sodium/alanine symporter n=1 Tax=Eubacterium sp. CAG:252 RepID=R6L3W3_9FIRM
Sodium/alanine symporter {ECO:0000313|EMBL:CDB68932.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L1_008_000M1_scaffold_1525_6
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7381..8262)
DNA (882bp) protein (294aa)
Putative permease n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWJ6_9FIRM
Putative permease {ECO:0000313|EMBL:EHQ90504.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
permease, DMT superfamily
L1_008_000M1_scaffold_1525_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8706..9566
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJS5_9CLOT
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:KJJ73290.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Transcriptional regulator
L1_008_000M1_scaffold_1525_8
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9630..10025)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Blautia producta RepID=UPI00035F2D23
SSU ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L1_008_000M1_scaffold_1525_9
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10046..10480)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Clostridium sp. CAG:964 RepID=R6U4S7_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
LSU ribosomal protein L13P
L1_008_000M1_scaffold_1525_10
unknown

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10825..12090
DNA (1266bp) protein (422aa)

This feature has no annotations

L1_008_000M1_scaffold_1525_11
Paenibacillus sp. E194, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12406..13590
DNA (1185bp) protein (395aa)
ABC transporter related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C13_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KJB86191.1}; TaxID=1458845 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. E194.;"
hypothetical protein
L1_008_000M1_scaffold_1525_12
Paenibacillus sp. Aloe-11, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13595..14656
DNA (1062bp) protein (354aa)
Family 2 glycosyl transferase n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CQK4_9BACL
Family 2 glycosyl transferase {ECO:0000313|EMBL:EHS55296.1}; TaxID=1050222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. Aloe-11.;"
glycosyltransferase
L1_008_000M1_scaffold_1525_13
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14619..15599
DNA (981bp) protein (327aa)
Putative family 2 glycosyltransferase n=1 Tax=Paenibacillus alvei RepID=D6QW62_PAEAL
Putative family 2 glycosyltransferase {ECO:0000313|EMBL:ADG29291.1}; TaxID=44250 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei (Bacillus alvei).;"
glycosyl transferase
L1_008_000M1_scaffold_1525_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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15981..18041
DNA (2061bp) protein (687aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N027_9FIRM
L1_008_000M1_scaffold_1525_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

18100..19317
DNA (1218bp) protein (406aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NPX8_9FIRM
L1_008_000M1_scaffold_1525_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

19367..20500
DNA (1134bp) protein (378aa)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MJ69_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CDB99693.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
glucose-1-phosphate adenylyltransferase, GlgD subunit
L1_008_000M1_scaffold_1525_17
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20572..22005
DNA (1434bp) protein (478aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
Glycogen synthase n=1 Tax=Clostridium sp. CAG:167 RepID=R5VJX7_9CLOT
starch synthase
Displaying 17 items

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