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L1_008_000M1_scaffold_1835

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1835_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(493..669)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z346_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91478.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_008_000M1_scaffold_1835_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(696..1868)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B40F08
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15557.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L1_008_000M1_scaffold_1835_3
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1936..3087)
DNA (1152bp) protein (384aa)
Sporulation integral membrane protein YlbJ n=3 Tax=Clostridiales RepID=H1CLU5_9FIRM
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:CDC05673.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
sporulation integral membrane protein YlbJ
L1_008_000M1_scaffold_1835_4
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4478..6007
DNA (1530bp) protein (510aa)
xylB1; xylulose kinase XylB (EC:2.7.1.17)
Xylulose kinase XylB {ECO:0000313|EMBL:AGC67909.1}; EC=2.7.1.17 {ECO:0000313|EMBL:AGC67909.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Xyk n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMM9_CLOSH
L1_008_000M1_scaffold_1835_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6930..9347)
DNA (2418bp) protein (806aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58031.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_008_000M1_scaffold_1835_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9401..13153)
DNA (3753bp) protein (1251aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SI60_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI79936.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000M1_scaffold_1835_7
unknown

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comp(13716..13898)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_8
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14005..18180)
DNA (4176bp) protein (1392aa)
Pectate lyase/Amb allergen n=3 Tax=Clostridium cellulovorans RepID=D9SX08_CLOC7
Pectate lyase/Amb allergen
Pectate lyase/Amb allergen {ECO:0000313|EMBL:ADL51369.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L1_008_000M1_scaffold_1835_9
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19347..19952)
DNA (606bp) protein (202aa)
Radical SAM superfamily n=1 Tax=Clostridium sp. CAG:411 RepID=R7HWD7_9CLOT
Radical SAM superfamily {ECO:0000313|EMBL:CDE43680.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
radical SAM protein
L1_008_000M1_scaffold_1835_10
unknown

Not on your lists

comp(19985..20968)
DNA (984bp) protein (328aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_11
unknown

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comp(21126..21275)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_12
unknown

Not on your lists

comp(21733..22314)
DNA (582bp) protein (194aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_13
unknown

Not on your lists

comp(22846..23709)
DNA (864bp) protein (288aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_14
unknown

Not on your lists

comp(23709..24017)
DNA (309bp) protein (103aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_15
unknown

Not on your lists

comp(24345..25037)
DNA (693bp) protein (231aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_16
unknown

Not on your lists

comp(25077..25328)
DNA (252bp) protein (84aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_17
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25702..27066)
DNA (1365bp) protein (455aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57818.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
KWG repeat domain protein id=2117096 bin=GWD2_Clostridiales_32_19 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
L1_008_000M1_scaffold_1835_18
unknown

Not on your lists

comp(27068..27442)
DNA (375bp) protein (125aa)

This feature has no annotations

L1_008_000M1_scaffold_1835_19
unknown

Not on your lists

comp(27446..27604)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 19 items

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