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L1_008_000M1_scaffold_2035

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2035_1
unknown

Not on your lists

comp(229..525)
DNA (297bp) protein (99aa)

This feature has no annotations

L1_008_000M1_scaffold_2035_2
unknown

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665..919
DNA (255bp) protein (85aa)

This feature has no annotations

L1_008_000M1_scaffold_2035_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2038..3309)
DNA (1272bp) protein (424aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=2 Tax=Bacteroides RepID=B0NU87_BACSE
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EDS13930.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_008_000M1_scaffold_2035_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3332..4576)
DNA (1245bp) protein (415aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Gamma-glutamyl phosphate reductase n=2 Tax=Clostridium botulinum B RepID=PROA_CLOBB
L1_008_000M1_scaffold_2035_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4727..5515
DNA (789bp) protein (263aa)
Hydrolase, TatD family n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BCN5_CLOBO
Hydrolase, TatD family {ECO:0000313|EMBL:EDS76784.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
TatD family hydrolase
L1_008_000M1_scaffold_2035_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5512..6267
DNA (756bp) protein (252aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EDM50692.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EDM50692.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Exodeoxyribonuclease III n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8G9_9FIRM
hypothetical protein
L1_008_000M1_scaffold_2035_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(6613..7122)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MQH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB98199.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_2035_8
unknown

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comp(7215..7439)
DNA (225bp) protein (75aa)

This feature has no annotations

L1_008_000M1_scaffold_2035_9
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7450..8856)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PVB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20465.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Putative peptidoglycan-binding domain-containing protein
L1_008_000M1_scaffold_2035_10
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

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comp(8874..9977)
DNA (1104bp) protein (368aa)
PREDICTED: uncharacterized protein LOC100877667 n=1 Tax=Megachile rotundata RepID=UPI000258EB63
Uncharacterized protein {ECO:0000313|EMBL:EAR88399.1}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
hypothetical protein
L1_008_000M1_scaffold_2035_11
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10062..11126)
DNA (1065bp) protein (355aa)
Aminopeptidase YpdF (MP-, MA-, MS-, AP-,NP-specific) n=1 Tax=Caloramator australicus RC3 RepID=I7J6L5_9CLOT
Aminopeptidase YpdF (MP-, MA-, MS-, AP-,NP-specific) {ECO:0000313|EMBL:CCJ34604.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
PepP; Xaa-Pro aminopeptidase
L1_008_000M1_scaffold_2035_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11151..12035)
DNA (885bp) protein (295aa)
nfo; endonuclease IV (EC:3.1.21.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CZV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA77191.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L1_008_000M1_scaffold_2035_13
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12035..12532)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) RepID=Q49Y39_STAS1
HAD superfamily (subfamily IIIA) phosphatase
HAD superfamily (Subfamily IIIA) phosphatase {ECO:0000313|EMBL:AIS52345.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
L1_008_000M1_scaffold_2035_14
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12818..12991)
DNA (174bp) protein (58aa)
30S ribosomal protein S21 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHE9_9CLOT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
30S ribosomal protein S21
L1_008_000M1_scaffold_2035_15
unknown

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13959..14177
DNA (219bp) protein (73aa)

This feature has no annotations

L1_008_000M1_scaffold_2035_16
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14268..14504
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI000360C4B7
Uncharacterized protein {ECO:0000313|EMBL:KHM45169.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L1_008_000M1_scaffold_2035_17
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

14859..16289
DNA (1431bp) protein (477aa)
hypothetical protein id=7200301 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
L1_008_000M1_scaffold_2035_18
unknown

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comp(16217..16375)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 18 items

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