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L1_008_000M1_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_31_1
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1..756)
DNA (756bp) protein (252aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Thermoanaerobacterium RepID=F6BIW7_THEXL
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
L1_008_000M1_scaffold_31_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(780..1385)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CXY0_9FIRM
clpP; ATP-dependent Clp protease proteolytic subunit
L1_008_000M1_scaffold_31_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(1492..2772)
DNA (1281bp) protein (427aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MAR9_9FIRM
trigger factor
L1_008_000M1_scaffold_31_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(2886..3722)
DNA (837bp) protein (279aa)
Metallophosphoesterase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6ML17_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDB94966.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
putative phosphohydrolase
L1_008_000M1_scaffold_31_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(3937..5433)
DNA (1497bp) protein (499aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MGW3_9FIRM
Threonine synthase {ECO:0000313|EMBL:CDB95254.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_31_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5606..6019)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97376.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_31_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(6191..7591)
DNA (1401bp) protein (467aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M9M1_9FIRM
L1_008_000M1_scaffold_31_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7859..8077
DNA (219bp) protein (73aa)
Small, acid-soluble spore protein, alpha/beta type n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECS1_9CLOT
Small, acid-soluble spore protein, alpha/beta type {ECO:0000313|EMBL:EEG30715.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
small acid-soluble spore protein alpha/beta type
L1_008_000M1_scaffold_31_9
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8243..8473)
DNA (231bp) protein (77aa)
Protein containing Zn-finger domain n=1 Tax=Clostridium sp. CAG:138 RepID=R6AIJ1_9CLOT
Protein containing Zn-finger domain {ECO:0000313|EMBL:CDA51788.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
L1_008_000M1_scaffold_31_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(8506..9789)
DNA (1284bp) protein (428aa)
Aluminum resistance family protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NRY0_9FIRM
Aluminum resistance family protein {ECO:0000313|EMBL:CDC00467.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
aluminum resistance family protein
L1_008_000M1_scaffold_31_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9779..10222)
DNA (444bp) protein (148aa)
ACT domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT99_CLOCD
ACT domain-containing protein
ACT domain-containing protein {ECO:0000313|EMBL:AEV68346.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_31_12
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10258..10839)
DNA (582bp) protein (194aa)
Indolepyruvate oxidoreductase subunit beta {ECO:0000313|EMBL:EGC04723.1}; EC=1.2.7.8 {ECO:0000313|EMBL:EGC04723.1};; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
indolepyruvate oxidoreductase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D91
L1_008_000M1_scaffold_31_13
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10852..12582)
DNA (1731bp) protein (577aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT96_CLOCD
indolepyruvate ferredoxin oxidoreductase subunit alpha
L1_008_000M1_scaffold_31_14
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12630..13940)
DNA (1311bp) protein (437aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
Phenylacetate--CoA ligase n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q226_CALOW
L1_008_000M1_scaffold_31_15
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13940..15418)
DNA (1479bp) protein (493aa)
SSS family solute/sodium (Na+) symporter n=1 Tax=Clostridium thermocellum BC1 RepID=U4MWU0_CLOTM
Sodium/proline symporter {ECO:0000313|EMBL:GAE86904.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
SSS family solute/sodium (Na+) symporter
L1_008_000M1_scaffold_31_16
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15603..16064)
DNA (462bp) protein (154aa)
Sporulation protein YtxC n=7 Tax=Clostridium thermocellum RepID=A3DH49_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAE89431.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L1_008_000M1_scaffold_31_17
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16061..16765)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z8I9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ74785.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L1_008_000M1_scaffold_31_18
unknown

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16878..17003
DNA (126bp) protein (42aa)

This feature has no annotations

L1_008_000M1_scaffold_31_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17019..18212)
DNA (1194bp) protein (398aa)
Amidohydrolase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M3A5_CLOCD
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CDA10773.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_008_000M1_scaffold_31_20
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18238..18825)
DNA (588bp) protein (196aa)
TOPRIM domain-containing protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUN2_9FIRM
TOPRIM domain-containing protein
TOPRIM domain-containing protein {ECO:0000313|EMBL:CDZ23700.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_008_000M1_scaffold_31_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18937..20274
DNA (1338bp) protein (446aa)
putative RNA methyltransferase CTC_02481 (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:352 RepID=R6RRV3_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDC37162.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L1_008_000M1_scaffold_31_22
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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20467..21573
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036F7E66
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHL68266.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
signaling protein
L1_008_000M1_scaffold_31_23
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21959..22954)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74911.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
spore photoproduct lyase
L1_008_000M1_scaffold_31_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23250..24149
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35398.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
trxB; thioredoxin reductase
L1_008_000M1_scaffold_31_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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24238..26829
DNA (2592bp) protein (864aa)
5'-Nucleotidase domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIX4_9FIRM
5'-Nucleotidase domain protein {ECO:0000313|EMBL:CDB98595.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
copper amine oxidase domain-containing protein
L1_008_000M1_scaffold_31_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26834..27475
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97649.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Abortive infection protein
L1_008_000M1_scaffold_31_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28061..28570
DNA (510bp) protein (170aa)
Putative membrane protein n=11 Tax=Clostridium difficile RepID=C9XLC8_CLODC
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE05397.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L1_008_000M1_scaffold_31_28
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28619..29392)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z5C7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ12307.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L1_008_000M1_scaffold_31_29
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29628..30041)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW58_9FIRM
Domain of unknown function (DUF1893).
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_31_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30034..30588)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90802.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
Displaying items 1-30 of 158 in total

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