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L1_008_000M1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_281_1
unknown

Not on your lists

comp(46..456)
DNA (411bp) protein (137aa)

This feature has no annotations

L1_008_000M1_scaffold_281_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1083..8372)
DNA (7290bp) protein (2430aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7E9_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDE35280.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L1_008_000M1_scaffold_281_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

8987..9673
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HV56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28411.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_281_4
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9666..10046
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y007_9FIRM
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
L1_008_000M1_scaffold_281_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

10138..11085
DNA (948bp) protein (316aa)
Glucokinase ROK family n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKH9_9FIRM
Glucokinase ROK family {ECO:0000313|EMBL:CDB96494.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ROK family glucokinase
L1_008_000M1_scaffold_281_6
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11317..13329)
DNA (2013bp) protein (671aa)
Ig-like domain-containing surface protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W942_DESOD
Ig-like domain-containing surface protein
Ig-like domain-containing surface protein {ECO:0000313|EMBL:AET68683.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L1_008_000M1_scaffold_281_7
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13519..15423)
DNA (1905bp) protein (635aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=E2RUD2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFQ79279.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
L1_008_000M1_scaffold_281_8
unknown

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comp(15598..16659)
DNA (1062bp) protein (354aa)

This feature has no annotations

L1_008_000M1_scaffold_281_9
unknown

Not on your lists

comp(17208..18431)
DNA (1224bp) protein (408aa)
GLUG domain protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPT3_9BACT
M1_2734; halomucin
L1_008_000M1_scaffold_281_10
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18442..20706)
DNA (2265bp) protein (755aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F5C0_CLOSG
putative protease
Putative uncharacterized protein {ECO:0000313|EMBL:EHN13582.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
L1_008_000M1_scaffold_281_11
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20722..23763)
DNA (3042bp) protein (1014aa)
RCC1 repeat-containing protein id=1963528 bin=GWD2_Desulfuromonadales_54_10 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
regulator of chromosome condensation, RCC1
Tax=GWD2_Desulfuromonadales_54_10_curated
L1_008_000M1_scaffold_281_12
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24224..24811)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L7D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY68912.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
rubrerythrin
L1_008_000M1_scaffold_281_13
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25241..26935
DNA (1695bp) protein (565aa)
Peptidoglycan-binding LysM n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P7R7_9FIRM
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:CDC19520.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L1_008_000M1_scaffold_281_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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27811..28350
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55300.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator
L1_008_000M1_scaffold_281_15
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28340..28762
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJF4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS46560.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_008_000M1_scaffold_281_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28919..30517)
DNA (1599bp) protein (533aa)
Potassium/proton antiporter CPA1 family (TC 2.A.36) n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1N7_9FIRM
Potassium/proton antiporter CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CCY30902.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sodium/hydrogen exchanger
L1_008_000M1_scaffold_281_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31512..32234)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31511.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
glutamate synthase subunit alpha domain-containing protein
L1_008_000M1_scaffold_281_18
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32234..33478)
DNA (1245bp) protein (415aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAG7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23923.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_008_000M1_scaffold_281_19
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33500..33937)
DNA (438bp) protein (146aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LQ97_TREBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23922.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_008_000M1_scaffold_281_20
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(33961..35466)
DNA (1506bp) protein (502aa)
gltB; Archaeal glutamate synthase [NADPH] (EC:1.4.1.13)
Putative uncharacterized protein id=3445681 bin=GWF2_Clostridiales_36_10 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L1_008_000M1_scaffold_281_21
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35466..36587)
DNA (1122bp) protein (374aa)
Class II glutamine amidotransferase n=1 Tax=Clostridium leptum CAG:27 RepID=R6NCS0_9CLOT
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDC03991.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glutamine amidotransferase
L1_008_000M1_scaffold_281_22
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(37082..38500)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MPB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87652.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_281_23
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(38749..39612)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99588.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_281_24
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(39643..42285)
DNA (2643bp) protein (881aa)
Neutral endopeptidase n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9TBH4_PAEAL
Neutral endopeptidase {ECO:0000313|EMBL:EPY13668.1}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
peptidase
L1_008_000M1_scaffold_281_25
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42350..44023)
DNA (1674bp) protein (558aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium sp. CAG:632 RepID=R5KDV8_9CLOT
L1_008_000M1_scaffold_281_26
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45031..45531
DNA (501bp) protein (167aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXY8_CLOA9
L1_008_000M1_scaffold_281_27
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(45989..47191)
DNA (1203bp) protein (401aa)
Elongation factor Tu n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MJG4_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
translation elongation factor Tu
L1_008_000M1_scaffold_281_28
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(47405..49486)
DNA (2082bp) protein (694aa)
Elongation factor G n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4J8_ETHHY
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
translation elongation factor G
L1_008_000M1_scaffold_281_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(49721..50191)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXR3_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
30S ribosomal protein S7
L1_008_000M1_scaffold_281_30
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(50322..50747)
DNA (426bp) protein (142aa)
30S ribosomal protein S12 n=2 Tax=Clostridium RepID=H2JHI9_9CLOT
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Displaying items 1-30 of 43 in total

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