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L1_008_000M1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_434_1
unknown

Not on your lists

50..730
DNA (681bp) protein (227aa)

This feature has no annotations

L1_008_000M1_scaffold_434_2
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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727..2187
DNA (1461bp) protein (487aa)
Copper amine oxidase-like domain-containing protein n=5 Tax=Clostridium thermocellum RepID=A3DKA4_CLOTH
copper amine oxidase-like domain-containing protein
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:ABN54383.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_434_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2317..2676)
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8S1N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37955.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L1_008_000M1_scaffold_434_4
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(2803..4038)
DNA (1236bp) protein (412aa)
Putative hydrolase id=3837659 bin=GWF2_Clostridiales_36_10 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative hydrolase
Tax=GWF2_Clostridiales_36_10_curated
L1_008_000M1_scaffold_434_5
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

4119..5687
DNA (1569bp) protein (523aa)
Peptidase S08 family protein id=3837657 bin=GWF2_Clostridiales_36_10 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
peptidase S08 family protein
Tax=GWF2_Clostridiales_36_10_curated
L1_008_000M1_scaffold_434_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5689..7395
DNA (1707bp) protein (569aa)
Peptidase S08 family protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L252_OSCVS
peptidase S08 family protein
Peptidase S08 family protein {ECO:0000313|EMBL:BAL01817.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_434_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7793..9079
DNA (1287bp) protein (429aa)
LysM domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ATZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55947.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative glycosyl hydrolase
L1_008_000M1_scaffold_434_8
unknown

Not on your lists

9690..9941
DNA (252bp) protein (84aa)

This feature has no annotations

L1_008_000M1_scaffold_434_9
unknown

Not on your lists

10143..10394
DNA (252bp) protein (84aa)

This feature has no annotations

L1_008_000M1_scaffold_434_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(10672..11982)
DNA (1311bp) protein (437aa)
Cyclomaltodextrinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MUB9_9FIRM
Cyclomaltodextrinase {ECO:0000313|EMBL:CDB99444.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Glycoside Hydrolase Family 13 protein
L1_008_000M1_scaffold_434_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12143..12847
DNA (705bp) protein (235aa)
Sporulation protein YunB n=7 Tax=Clostridium thermocellum RepID=A3DGA1_CLOTH
sporulation protein YunB
Sporulation protein YunB {ECO:0000313|EMBL:ABN52980.1}; Flags: Precursor;; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_434_12
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

12986..13216
DNA (231bp) protein (77aa)
Tryptophan RNA-binding attenuator protein n=4 Tax=Clostridium RepID=B8I1Y8_CLOCE
Tryptophan RNA-binding attenuator protein
Tax=GWC2_Clostridiales_40_7_curated
L1_008_000M1_scaffold_434_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13220..14980
DNA (1761bp) protein (587aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
pyk; Pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=2 Tax=Clostridium RepID=A7VZ96_9CLOT
L1_008_000M1_scaffold_434_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14993..15415
DNA (423bp) protein (141aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVP3_9CLOT
Thioesterase family protein {ECO:0000313|EMBL:KAJ50873.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
thioesterase superfamily protein
L1_008_000M1_scaffold_434_15
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

Not on your lists

15567..17747
DNA (2181bp) protein (727aa)
copper-translocating P-type ATPase
copper-translocating P-type ATPase id=2169818 bin=GWE2_Clostridiales_32_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
Tax=GWE2_Clostridiales_32_10_curated
L1_008_000M1_scaffold_434_16
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17766..17972
DNA (207bp) protein (69aa)
Copper ion binding protein n=7 Tax=Clostridium thermocellum RepID=A3DDE4_CLOTH
copper ion binding protein
COP associated protein {ECO:0000313|EMBL:KKH47742.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
L1_008_000M1_scaffold_434_17
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18122..19792
DNA (1671bp) protein (557aa)
ATP phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQ43_9CLOT
ATP phosphoribosyltransferase
Tax=BJP_IG2103_Clostridiales_50_15
L1_008_000M1_scaffold_434_18
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19789..20505
DNA (717bp) protein (239aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2J4_CLOCD
L1_008_000M1_scaffold_434_19
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20508..21146
DNA (639bp) protein (213aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX38_MAHA5
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
L1_008_000M1_scaffold_434_20
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

21177..21551
DNA (375bp) protein (125aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NAA8_9FIRM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDB94852.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
glyoxalase/bleomycin resistance protein/dioxygenase
L1_008_000M1_scaffold_434_21
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21731..23605
DNA (1875bp) protein (625aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D8F5
L1_008_000M1_scaffold_434_22
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23615..24415
DNA (801bp) protein (267aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQ45_9CLOT
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:CCY67204.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hemolysin TlyA family protein
L1_008_000M1_scaffold_434_23
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24431..25303
DNA (873bp) protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJJ6_THETR
putative sugar kinase
L1_008_000M1_scaffold_434_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25339..27024
DNA (1686bp) protein (562aa)
DNA repair protein RecN n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBC1_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
DNA repair protein RecN
L1_008_000M1_scaffold_434_25
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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27166..27573
DNA (408bp) protein (136aa)
Positive regulator of sigma(E), RseC/MucC n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDD5_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
L1_008_000M1_scaffold_434_26
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27586..28296
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JI92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:GAE90232.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
hypothetical protein
L1_008_000M1_scaffold_434_27
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28370..28576
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=H2JI94_9CLOT
hypothetical protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EGD46200.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L1_008_000M1_scaffold_434_28
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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28590..29657
DNA (1068bp) protein (356aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CD09_9ACTN
2-oxoglutarate ferredoxin oxidoreductase alpha subunit
2-oxoglutarate ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:BAN77084.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L1_008_000M1_scaffold_434_29
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29650..30432
DNA (783bp) protein (261aa)
vorA; Ketoisovalerate oxidoreductase subunit VorA (EC:1.2.7.7)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases beta subunit n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MSK4_9FIRM
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases beta subunit {ECO:0000313|EMBL:CDF02793.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L1_008_000M1_scaffold_434_30
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

30432..30974
DNA (543bp) protein (181aa)
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family id=3901516 bin=GWC2_ACD39_50_8 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=GWC2_ACD39_50_8_curated
Displaying items 1-30 of 58 in total

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