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L1_008_000M1_scaffold_966

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_966_1
unknown

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2..739
DNA (738bp) protein (246aa)

This feature has no annotations

L1_008_000M1_scaffold_966_2
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(793..1044)
DNA (252bp) protein (84aa)
Putative transition state regulator abh n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1XYD4_ANEAE
Putative transition state regulator abh {ECO:0000313|EMBL:ERI05022.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
transcription regulator AbrB
L1_008_000M1_scaffold_966_3
Clostridium sp. CAG:793, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1155..3134)
DNA (1980bp) protein (660aa)
Spore germination protein n=1 Tax=Clostridium sp. CAG:793 RepID=R5N5N5_9CLOT
Spore germination protein {ECO:0000313|EMBL:CCY99063.1}; TaxID=1262840 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:793.;"
spore germination protein
L1_008_000M1_scaffold_966_4
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3155..4651)
DNA (1497bp) protein (499aa)
GerA spore germination protein n=3 Tax=Clostridium thermocellum RepID=A3DD73_CLOTH
GerA spore germination protein
GerA spore germination protein {ECO:0000313|EMBL:ABN51902.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_966_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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4814..7267
DNA (2454bp) protein (818aa)
Cellulosome enzyme dockerin type I n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NCE3_9FIRM
Cellulosome enzyme dockerin type I {ECO:0000313|EMBL:CDB95522.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_966_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7458..8087
DNA (630bp) protein (210aa)
Multimeric flavodoxin WrbA family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA21_9FIRM
Multimeric flavodoxin WrbA family protein {ECO:0000313|EMBL:CDE36215.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Multimeric flavodoxin WrbA family protein
L1_008_000M1_scaffold_966_7
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8151..8981)
DNA (831bp) protein (277aa)
ATP-binding protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002F134ED
Nucleotide-binding protein {ECO:0000313|EMBL:CDL92410.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
chromosome partitioning ATPase
L1_008_000M1_scaffold_966_8
unknown

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comp(8959..9120)
DNA (162bp) protein (54aa)

This feature has no annotations

L1_008_000M1_scaffold_966_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9219..10079
DNA (861bp) protein (287aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECI5_9CLOT
methylenetetrahydrofolate reductase
L1_008_000M1_scaffold_966_10
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10102..10812
DNA (711bp) protein (237aa)
metH2; vitamin B12-dependent methionine synthase MetH (EC:2.1.1.13)
Vitamin B12-dependent methionine synthase MetH {ECO:0000313|EMBL:AFS79528.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AFS79528.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Vitamin B12-dependent methionine synthase MetH n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0G1_CLOA9
L1_008_000M1_scaffold_966_11
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10784..13189
DNA (2406bp) protein (802aa)
metH1; vitamin B12-dependent methionine synthase MetH (EC:2.1.1.13)
Vitamin B12-dependent methionine synthase MetH {ECO:0000313|EMBL:AFS79527.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AFS79527.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Vitamin B12-dependent methionine synthase MetH n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2Y5_CLOA9
L1_008_000M1_scaffold_966_12
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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13207..14016
DNA (810bp) protein (270aa)
amidohydrolase 2 (EC:3.5.1.-)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNN7_9FIRM
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDB99257.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_966_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14041..16233)
DNA (2193bp) protein (731aa)
Ferrous iron transporter B n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KMH1_9CLOT
Ferrous iron transporter B {ECO:0000313|EMBL:CDB63317.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ferrous iron transport protein B
L1_008_000M1_scaffold_966_14
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16257..16478)
DNA (222bp) protein (74aa)
FeoA family protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQG6_CELLD
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ADZ84950.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L1_008_000M1_scaffold_966_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17544..25817
DNA (8274bp) protein (2758aa)
RCC1 repeat-containing protein
Regulator of chromosome condensation-like protein id=4733503 bin=GWC2_Nitrospirae-rel_56_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
BNR repeat domain protein {ECO:0000313|EMBL:KFE71449.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
L1_008_000M1_scaffold_966_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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25831..27231
DNA (1401bp) protein (467aa)
Copper amine oxidase-like domain-containing protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MY40_9FIRM
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:CDC00834.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
copper amine oxidase-like domain-containing protein
L1_008_000M1_scaffold_966_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

27332..28675
DNA (1344bp) protein (448aa)
Copper amine oxidase domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MME7_9FIRM
Copper amine oxidase domain protein {ECO:0000313|EMBL:CDC00833.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
copper amine oxidase domain-containing protein
L1_008_000M1_scaffold_966_18
unknown

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28727..31462
DNA (2736bp) protein (912aa)

This feature has no annotations

Displaying 18 items

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