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L1_008_000M1_scaffold_394_24

Organism: dasL1_008_000M1_concoct_89_fa

near complete RP 47 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(22155..22907)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 245.0
  • Bit_score: 255
  • Evalue 4.50e-65
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 238.0
  • Bit_score: 251
  • Evalue 1.30e-64
tRNA pseudouridine synthase A n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CPX3_THEYO similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 245.0
  • Bit_score: 255
  • Evalue 3.20e-65

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Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 753
ATGGAAAATATAAAAAATATTGCAATGAGAATCAGGTATGACGGAACAAATTACCACGGCTGGCAGTCTCAATCTAATGGGGTAACTGTTCAGAGCACTATAGAAAAGGCTCTTTCGGAACTGACCGGGTCTGATGTAAAAGTCACAGGCTGCAGCAGAACCGACGCCGGCGTACATGCTTTGGATTATATTTTTAATTTTAAATCAGAAACAAAAATCCCGGTGGAAAAACTGCCGTACGCGTTGAATTATAGGTTAGAAGACGATATAACCGCCCTGGAAGCCTGGGTTGCGGCGGATGATTTTAATTCGCGTTTTTCTGTAAACGGAAAGCGGTATATTTATAATATTTGGAACAGCGCTTTAAAAAATCCATTTTTAAATAGATATAGCTGGCATTTTCCATACAAATTAGATTTTAAAAAGATAAAAGATGCTGCTGTTTTTTTTGAGGGAAAGCATGATTTTGCTGGGTTTATGGCGGCAGGAGGACAGCAGAAAACGACTGTCAGAACTATTAGCGTATGCGGAGCGGAGCAGAGCGGGGAGTTTCCCGAACTGCTGACAATAACCGTTGAAGCTGACGCATTCTTATATAATATGGTTAGGATAATTGTTGGTACGCTTGCGGATGTAGGCACCGGCAGAATTGAGGTTTCGGATATTCCTGAAATTATATGCAGTAAAGACAGACGCCAAGGCGGTATTACAGCTCCGCCTCAGGGGTTGTTTCTAAAAAAAGTATATTTATAG
PROTEIN sequence
Length: 251
MENIKNIAMRIRYDGTNYHGWQSQSNGVTVQSTIEKALSELTGSDVKVTGCSRTDAGVHALDYIFNFKSETKIPVEKLPYALNYRLEDDITALEAWVAADDFNSRFSVNGKRYIYNIWNSALKNPFLNRYSWHFPYKLDFKKIKDAAVFFEGKHDFAGFMAAGGQQKTTVRTISVCGAEQSGEFPELLTITVEADAFLYNMVRIIVGTLADVGTGRIEVSDIPEIICSKDRRQGGITAPPQGLFLKKVYL*