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L1_008_000M1_scaffold_6209_10

Organism: dasL1_008_000M1_concoct_89_fa

near complete RP 47 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 5338..5649

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQA9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 98.0
  • Bit_score: 108
  • Evalue 3.40e-21
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB75116.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 98.0
  • Bit_score: 108
  • Evalue 4.80e-21
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 103.0
  • Bit_score: 82
  • Evalue 5.70e-14

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 312
TTGAATGTACAGGATAGACTTAATGAACTGCTAAAAAAACAAAATTTATCACGGTATAGGCTTGCTAAAAACAGCGGAATACCAGAGGAAACATTGACAAATATTTTTAAGCGTGGAAGTATTCCAACAATTCCAACACTTGAAATGATTTGTAAGGGGTTAAATATTTCTCTTTCAGAATTTTTTGCAGAAGATGATATGATTGAGTGTTCTCCAGAGCTTATGGAACTACATGATGAATGGAAATTCTTAACACAAAAACAAAAAAATTTAGTTTTAGAATTAATAAAAGAAATGAGAAATAAAAAATAA
PROTEIN sequence
Length: 104
LNVQDRLNELLKKQNLSRYRLAKNSGIPEETLTNIFKRGSIPTIPTLEMICKGLNISLSEFFAEDDMIECSPELMELHDEWKFLTQKQKNLVLELIKEMRNKK*