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L1_008_000M1_scaffold_6209

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_6209_1
unknown

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comp(676..1068)
DNA (393bp) protein (131aa)

This feature has no annotations

L1_008_000M1_scaffold_6209_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1091..2224)
DNA (1134bp) protein (378aa)
Metallo-beta-lactamase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPV2_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDN01877.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_6209_3
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2424..2783
DNA (360bp) protein (120aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4R2_DESDJ
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFL98946.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L1_008_000M1_scaffold_6209_4
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2969..3310
DNA (342bp) protein (114aa)
Helix-turn-helix family protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FH68_9CLOT
Helix-turn-helix family protein {ECO:0000313|EMBL:CDE13828.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
toxin-antitoxin system
L1_008_000M1_scaffold_6209_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3452..3787
DNA (336bp) protein (112aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RMN7_9CLOT
Regulatory protein {ECO:0000313|EMBL:ENZ10467.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_6209_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4112..4435
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Clostridium clostridioforme RepID=N9YDB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ65571.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
HTH-type transcriptional regulator type 3
L1_008_000M1_scaffold_6209_7
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4432..4788
DNA (357bp) protein (119aa)
Helix-turn-helix family protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FH68_9CLOT
Helix-turn-helix family protein {ECO:0000313|EMBL:CDE13828.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_6209_8
unknown

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4834..4956
DNA (123bp) protein (41aa)

This feature has no annotations

L1_008_000M1_scaffold_6209_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5024..5299
DNA (276bp) protein (92aa)
DNA-binding protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B4AFAA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK62713.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_6209_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5338..5649
DNA (312bp) protein (104aa)
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQA9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB75116.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
XRE family transcriptional regulator
Displaying 10 items

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