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L1_008_000M1_scaffold_3259

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3259_1
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..234)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFV44243.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L1_008_000M1_scaffold_3259_2
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288..1220)
DNA (933bp) protein (311aa)
Exonuclease RdgC n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5K6_9DELT
Exonuclease RdgC {ECO:0000313|EMBL:EHJ49565.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
L1_008_000M1_scaffold_3259_3
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1240..3543)
DNA (2304bp) protein (768aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y702_BILWA
L1_008_000M1_scaffold_3259_4
unknown

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comp(3555..4205)
DNA (651bp) protein (217aa)

This feature has no annotations

L1_008_000M1_scaffold_3259_5
unknown

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comp(4215..4394)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_000M1_scaffold_3259_6
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4418..4945)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y700_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV44238.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
putative conjugal transfer protein
L1_008_000M1_scaffold_3259_7

Not on your lists

comp(4960..6168)
DNA (1209bp) protein (403aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=J9R7G9_9BACT
Mating pair formation protein {ECO:0000313|EMBL:AFR43930.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
trbL; P-type conjugative transfer protein TrbL
L1_008_000M1_scaffold_3259_8
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6321..7073)
DNA (753bp) protein (251aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y6Z8_BILWA
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EFV44236.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
conjugal transfer protein TrbJ
L1_008_000M1_scaffold_3259_9
unknown

Not on your lists

comp(7122..7577)
DNA (456bp) protein (152aa)

This feature has no annotations

L1_008_000M1_scaffold_3259_10
unknown

Not on your lists

comp(7634..8062)
DNA (429bp) protein (143aa)

This feature has no annotations

L1_008_000M1_scaffold_3259_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8077..8589)
DNA (513bp) protein (171aa)
Related to nuclease id=1701992 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
nuclease
Tax=GWB2_Desulfobacterales_56_26_curated
L1_008_000M1_scaffold_3259_12

Not on your lists

comp(8598..9932)
DNA (1335bp) protein (445aa)
conjugal transfer protein TrbI n=1 Tax=Aeromonas caviae RepID=UPI0002198593
Mating pair formation protein {ECO:0000313|EMBL:AFR43927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugation TrbI family protein
L1_008_000M1_scaffold_3259_13
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9934..10809)
DNA (876bp) protein (292aa)
P-type conjugative transfer protein TrbG n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y6Z6_BILWA
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EFV44234.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
P-type conjugative transfer protein TrbG
L1_008_000M1_scaffold_3259_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10823..11389)
DNA (567bp) protein (189aa)
lytic transglycosylase n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B6DD61
Lytic transglycosylase catalytic {ECO:0000313|EMBL:KHK00373.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Lytic transglycosylase catalytic
L1_008_000M1_scaffold_3259_15
unknown

Not on your lists

11416..11856
DNA (441bp) protein (147aa)

This feature has no annotations

L1_008_000M1_scaffold_3259_16
unknown

Not on your lists

comp(11820..12005)
DNA (186bp) protein (62aa)

This feature has no annotations

L1_008_000M1_scaffold_3259_17
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12016..12261)
DNA (246bp) protein (82aa)
pilus biosynthesis protein PilV n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A67DDC
PilV {ECO:0000313|EMBL:KHK00367.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Displaying 17 items

View Taxonomy