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L1_008_000M1_scaffold_1149

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1149_1
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78..1907)
DNA (1830bp) protein (610aa)
conjugal transfer protein TraG n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B2FA98
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EIG52099.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
putative TRAG family protein
L1_008_000M1_scaffold_1149_2
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2055..2345
DNA (291bp) protein (97aa)
prevent-host-death protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B39154
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AEI81505.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
L1_008_000M1_scaffold_1149_3
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2332..2700
DNA (369bp) protein (123aa)
plasmid stabilization protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B46A83
Plasmid stabilization system {ECO:0000313|EMBL:EGV50387.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
plasmid stabilization system protein
L1_008_000M1_scaffold_1149_4
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2710..3960)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B5280E
Conjugative transfer protein TrbI {ECO:0000313|EMBL:KHK00340.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Conjugation TrbI family protein
L1_008_000M1_scaffold_1149_5
unknown

Not on your lists

comp(3969..4484)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B493A9
L1_008_000M1_scaffold_1149_6
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4484..5413)
DNA (930bp) protein (310aa)
conjugal transfer protein TrbG n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B3B10A
Conjugative transfer protein TrbG {ECO:0000313|EMBL:KHK00338.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
P-type conjugative transfer protein TrbG
L1_008_000M1_scaffold_1149_7
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5422..6162)
DNA (741bp) protein (247aa)
Type IV secretion system protein VirB5 n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y8Z3_BILWA
Type IV secretion system protein VirB5 {ECO:0000313|EMBL:EFV43542.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
conjugal transfer protein
L1_008_000M1_scaffold_1149_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6704..7117
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P38 RepID=T4Q3R7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGA91906.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000M1_scaffold_1149_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7163..7705
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZNY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45054.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L1_008_000M1_scaffold_1149_10
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7761..8399)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IF14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20318.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
MobA/MobL family protein
L1_008_000M1_scaffold_1149_11
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8490..8801)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N1ZPP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ18947.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_008_000M1_scaffold_1149_12
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8918..9085)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=UPI0003B4691E
Uncharacterized protein {ECO:0000313|EMBL:EOS65323.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_008_000M1_scaffold_1149_13
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9168..11015)
DNA (1848bp) protein (616aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GK61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI54939.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
site-specific recombinase
L1_008_000M1_scaffold_1149_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11060..12073)
DNA (1014bp) protein (338aa)
P-type conjugative transfer protein TrbL n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y8Z4_BILWA
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EFV43543.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
P-type conjugative transfer protein TrbL
L1_008_000M1_scaffold_1149_15
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12083..12883)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B4985A
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EFV43544.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
P-type conjugative transfer protein TrbJ
L1_008_000M1_scaffold_1149_16
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12933..15347)
DNA (2415bp) protein (805aa)
VirB4 family type IV secretion/conjugal transfer ATPase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y8Z8_BILWA
VirB4 family type IV secretion/conjugal transfer ATPase {ECO:0000313|EMBL:EFV43547.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
trbE; Conjugal transfer protein trbE
L1_008_000M1_scaffold_1149_17
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15341..15637)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UPP1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52486.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
conjugal transfer TrbD family protein
L1_008_000M1_scaffold_1149_18
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15634..15987)
DNA (354bp) protein (118aa)
Type IV secretion system protein VirB2 n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y900_BILWA
Type IV secretion system protein VirB2 {ECO:0000313|EMBL:EFV43549.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
conjugal transfer protein TrbC
L1_008_000M1_scaffold_1149_19
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15956..16168)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UPN8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52483.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_1149_20
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16187..17164)
DNA (978bp) protein (326aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UPN7_9DELT
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EGW52482.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
trbB; putative conjugal transfer protein trbB
L1_008_000M1_scaffold_1149_21
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17164..17625)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y902_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43551.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
L1_008_000M1_scaffold_1149_22
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17634..18359)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y903_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43552.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
traL; Protein traL
L1_008_000M1_scaffold_1149_23
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18378..18737)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y904_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43553.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L1_008_000M1_scaffold_1149_24
unknown

Not on your lists

comp(18709..18843)
DNA (135bp) protein (45aa)

This feature has no annotations

L1_008_000M1_scaffold_1149_25
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18957..19256
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y905_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43554.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L1_008_000M1_scaffold_1149_26
unknown

Not on your lists

19324..19641
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B475E6
L1_008_000M1_scaffold_1149_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19653..20402)
DNA (750bp) protein (250aa)
Hydrolase, TatD family n=3 Tax=Enterobacteriaceae RepID=V7IKQ8_SALET
Hydrolase TatD {ECO:0000313|EMBL:KDR86535.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
TatD-related deoxyribonuclease
L1_008_000M1_scaffold_1149_28
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..21772)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Vibrio cholerae HE-45 RepID=J1YIB4_VIBCL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK53704.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
L1_008_000M1_scaffold_1149_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21769..22635)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DY2_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46949.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
L1_008_000M1_scaffold_1149_30
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22649..24640)
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F5B63F
kap P-loop domain-containing protein
Tax=GWC2_Geobacteraceae_53_11_curated
Displaying items 1-30 of 34 in total

View Taxonomy