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L1_008_000M1_scaffold_1562

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1562_1
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1365)
DNA (1365bp) protein (455aa)
Dethiobiotin synthase {ECO:0000256|SAAS:SAAS00089806}; EC=6.3.3.3 {ECO:0000256|SAAS:SAAS00089806};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Adenosylmethionine-8-amino-7-oxononanoate transaminase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=T5R3B6_9DELT
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
L1_008_000M1_scaffold_1562_2
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1358..2299)
DNA (942bp) protein (314aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
biotin synthase (EC:2.8.1.6)
Biotin synthase n=2 Tax=Desulfovibrio RepID=D9YCR0_9DELT
L1_008_000M1_scaffold_1562_3
unknown

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comp(2553..2657)
DNA (105bp) protein (35aa)

This feature has no annotations

L1_008_000M1_scaffold_1562_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2684..3082)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCQ9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52847.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
MucR family transcriptional regulator
L1_008_000M1_scaffold_1562_5
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3279..4025)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNM5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52846.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1562_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4411..7779)
DNA (3369bp) protein (1123aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YCQ7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52845.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1562_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7905..9002)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCQ6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52844.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Fis family sigma-54 specific transcriptional regulator
L1_008_000M1_scaffold_1562_8
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9221..11779
DNA (2559bp) protein (853aa)
ATP-dependent helicase HrpB n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YCQ5_9DELT
ATP-dependent helicase HrpB {ECO:0000313|EMBL:EGW52843.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
ATP-dependent helicase HrpB
L1_008_000M1_scaffold_1562_9
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11839..12192)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCQ4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52842.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
cupin
L1_008_000M1_scaffold_1562_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12375..13340)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCQ3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52841.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
alpha/beta hydrolase fold protein
L1_008_000M1_scaffold_1562_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13369..14709
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNL9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52840.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1562_12
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14854..15057)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNL8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52839.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1562_13
unknown

Not on your lists

comp(15496..15585)
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_000M1_scaffold_1562_14
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15597..16916)
DNA (1320bp) protein (440aa)
Cell division protein FtsZ n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNL6_9DELT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
cell division protein FtsZ
L1_008_000M1_scaffold_1562_15
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16961..18196)
DNA (1236bp) protein (412aa)
Cell division protein ftsA n=2 Tax=Desulfovibrio RepID=D9YF74_9DELT
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
cell division protein FtsA
L1_008_000M1_scaffold_1562_16
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18232..19122)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YF75_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52835.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
polypeptide-transport-associated domain-containing protein
L1_008_000M1_scaffold_1562_17
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19107..19997)
DNA (891bp) protein (297aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Desulfovibrio RepID=D9YF76_9DELT
L1_008_000M1_scaffold_1562_18
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19990..21363)
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YF77_9DELT
murC; UDP-N-acetylmuramate--L-alanine ligase
Displaying 18 items

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