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L1_008_000M1_scaffold_1816

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1816_1
unknown

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN6_9DELT
L1_008_000M1_scaffold_1816_2
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135..2288)
DNA (2154bp) protein (718aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
DNA topoisomerase 1 n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN5_9DELT
topA; DNA topoisomerase
L1_008_000M1_scaffold_1816_3
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2285..4417)
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN4_9DELT
Antirestriction protein {ECO:0000313|EMBL:EIG52096.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein
L1_008_000M1_scaffold_1816_4
unknown

Not on your lists

comp(4404..4592)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B65B64
L1_008_000M1_scaffold_1816_5
unknown

Not on your lists

comp(4589..4930)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN2_9DELT
L1_008_000M1_scaffold_1816_6
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4930..5469)
DNA (540bp) protein (180aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN1_9DELT
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EHJ48822.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
putative conjugative transfer signal peptidase TraF
L1_008_000M1_scaffold_1816_7
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5466..7454)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGN0_9DELT
TRAG family protein {ECO:0000313|EMBL:EHJ48821.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
TRAG family protein
L1_008_000M1_scaffold_1816_8
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7567..9210)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EHM51859.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium valvarum F0432.;"
hypothetical protein
L1_008_000M1_scaffold_1816_9
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9221..10435)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM8_9DELT
Conjugative transfer protein TrbI {ECO:0000313|EMBL:KHK00340.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Conjugation TrbI family protein
L1_008_000M1_scaffold_1816_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10437..11357)
DNA (921bp) protein (307aa)
P-type conjugative transfer protein TrbG n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM7_9DELT
Conjugative transfer protein TrbG {ECO:0000313|EMBL:KHK00338.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
P-type conjugative transfer protein TrbG
L1_008_000M1_scaffold_1816_11
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11369..12109)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM6_9DELT
Type IV secretion system protein VirB5 {ECO:0000313|EMBL:EFV43542.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
conjugal transfer protein
L1_008_000M1_scaffold_1816_12
unknown

Not on your lists

12152..12649
DNA (498bp) protein (166aa)

This feature has no annotations

L1_008_000M1_scaffold_1816_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12946..13275)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7Z3_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS66078.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
L1_008_000M1_scaffold_1816_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13283..14428)
DNA (1146bp) protein (382aa)
conjugative transfer protein TrbL n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B349FF
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EFV43543.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
P-type conjugative transfer protein TrbL
L1_008_000M1_scaffold_1816_15
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14580..14735
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34331.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L1_008_000M1_scaffold_1816_16
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14732..15526)
DNA (795bp) protein (265aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=T5QW15_9DELT
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EHJ48806.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
P-type conjugative transfer protein TrbJ
L1_008_000M1_scaffold_1816_17
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15543..15863)
DNA (321bp) protein (107aa)
VirB4 family type IV secretion/conjugal transfer ATPase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM2_9DELT
Conjugative transfer protein TrbE {ECO:0000313|EMBL:KHK00334.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
trbE; Conjugal transfer protein trbE
L1_008_000M1_scaffold_1816_18
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15894..17969)
DNA (2076bp) protein (692aa)
VirB4 family type IV secretion/conjugal transfer ATPase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGM2_9DELT
Conjugative transfer protein TrbE {ECO:0000313|EMBL:KHK00334.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
CagE TrbE VirB component of type IV transporter system
L1_008_000M1_scaffold_1816_19
unknown

Not on your lists

18026..18511
DNA (486bp) protein (162aa)

This feature has no annotations

L1_008_000M1_scaffold_1816_20
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18816..19421)
DNA (606bp) protein (202aa)
lytic transglycosylase n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B6DD61
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EHJ48825.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
lytic transglycosylase
L1_008_000M1_scaffold_1816_21
unknown

Not on your lists

comp(20074..20199)
DNA (126bp) protein (42aa)
pilus biosynthesis protein PilV n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A67DDC
L1_008_000M1_scaffold_1816_22
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20253..21134)
DNA (882bp) protein (294aa)
pilus biosynthesis protein PilV n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A67DDC
Shufflon domain protein {ECO:0000313|EMBL:EHJ48819.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
L1_008_000M1_scaffold_1816_23
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21134..21556)
DNA (423bp) protein (141aa)
pilus assembly protein PilP n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A44FBF
PilM inner membrane family protein {ECO:0000313|EMBL:EHJ48818.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
putative PilM protein
L1_008_000M1_scaffold_1816_24
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21553..22515)
DNA (963bp) protein (321aa)
Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB75_9DELT
Type II secretion system protein E {ECO:0000313|EMBL:EHJ48817.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Type II secretion system protein E
L1_008_000M1_scaffold_1816_25
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22518..22991)
DNA (474bp) protein (158aa)
PilS domain-containing protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB74_9DELT
PilS domain-containing protein {ECO:0000313|EMBL:EHJ48816.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
PilS domain-containing protein
L1_008_000M1_scaffold_1816_26
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22988..24061)
DNA (1074bp) protein (358aa)
Type II secretion system F domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB73_9DELT
Type II secretion system F domain protein {ECO:0000313|EMBL:EHJ48815.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
type II secretion system protein
L1_008_000M1_scaffold_1816_27
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24058..25677)
DNA (1620bp) protein (540aa)
Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB72_9DELT
Twitching motility protein PilT {ECO:0000313|EMBL:KHK00243.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
type II secretion system protein E
L1_008_000M1_scaffold_1816_28
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25686..26312)
DNA (627bp) protein (209aa)
Type IV pilus biogenesis protein PilP n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YGL3_9DELT
type IV pilus biogenesis protein PilP
Type IV pilus biogenesis protein PilP {ECO:0000313|EMBL:ACS79760.1}; Flags: Precursor;; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
L1_008_000M1_scaffold_1816_29
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26579..27535)
DNA (957bp) protein (319aa)
Pilin accessory family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB70_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KHK00246.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
L1_008_000M1_scaffold_1816_30
unknown

Not on your lists

comp(27539..27844)
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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