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L1_008_000M1_scaffold_1978

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1978_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40..498)
DNA (459bp) protein (153aa)
UPI0003C7E148 related cluster n=1 Tax=unknown RepID=UPI0003C7E148
Transposase IS200 {ECO:0000313|EMBL:ETC18338.1}; TaxID=1410920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001590.;"
transposase
L1_008_000M1_scaffold_1978_2
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(639..2069)
DNA (1431bp) protein (477aa)
protease Do (EC:3.4.21.107)
Protease Do n=2 Tax=Desulfovibrio RepID=D9YD65_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52579.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_1978_3
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2084..3550)
DNA (1467bp) protein (489aa)
30S ribosomal protein S1 n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YD64_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52578.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
rpsA; 30S ribosomal protein S1
L1_008_000M1_scaffold_1978_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3876..5057)
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UP22_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52577.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
arabinose efflux permease family protein
L1_008_000M1_scaffold_1978_5
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5653..6450)
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=2 Tax=Desulfovibrio RepID=D9YD62_9DELT
L1_008_000M1_scaffold_1978_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6591..6779
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD61_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52747.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1978_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6882..8951)
DNA (2070bp) protein (690aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Methionine--tRNA ligase n=2 Tax=Desulfovibrio RepID=D9YD60_9DELT
methionyl-tRNA synthetase
L1_008_000M1_scaffold_1978_8
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9016..10125)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD59_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52745.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
PSP1 domain-containing protein
L1_008_000M1_scaffold_1978_9
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10401..10958
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD58_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52744.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
metal dependent phosphohydrolase
L1_008_000M1_scaffold_1978_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10986..12290
DNA (1305bp) protein (435aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01981}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_01981};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01981};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_01981};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_01981}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.11)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UP16_9DELT
L1_008_000M1_scaffold_1978_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12305..15550
DNA (3246bp) protein (1082aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UP15_9DELT
UvrD/REP helicase
L1_008_000M1_scaffold_1978_12
unknown

Not on your lists

comp(15457..15666)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_008_000M1_scaffold_1978_13
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15839..18523
DNA (2685bp) protein (895aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UP14_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52741.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1978_14
unknown

Not on your lists

18533..19096
DNA (564bp) protein (188aa)

This feature has no annotations

L1_008_000M1_scaffold_1978_15
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19227..20456
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD53_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52740.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
2-nitropropane dioxygenase
L1_008_000M1_scaffold_1978_16
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20803..21483)
DNA (681bp) protein (227aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YD52_9DELT
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00028972}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
outer membrane lipoprotein carrier protein LolA
L1_008_000M1_scaffold_1978_17
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21510..23978)
DNA (2469bp) protein (823aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UP11_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52738.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
cell division protein FtsK
L1_008_000M1_scaffold_1978_18
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23979..24536)
DNA (558bp) protein (186aa)
Elongation factor P n=2 Tax=Desulfovibrio RepID=D9YD50_9DELT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
elongation factor P
L1_008_000M1_scaffold_1978_19
unknown

Not on your lists

24561..24656
DNA (96bp) protein (32aa)

This feature has no annotations

L1_008_000M1_scaffold_1978_20
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24720..25364
DNA (645bp) protein (215aa)
Probable GTP-binding protein EngB n=2 Tax=Desulfovibrio RepID=D9YD49_9DELT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
engB; ribosome biogenesis GTP-binding protein YsxC
L1_008_000M1_scaffold_1978_21
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25629..27095)
DNA (1467bp) protein (489aa)
Cation diffusion facilitator family transporter n=2 Tax=Desulfovibrio RepID=D9YD48_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52735.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
cation diffusion facilitator family transporter
L1_008_000M1_scaffold_1978_22
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27154..27885)
DNA (732bp) protein (244aa)
Outer membrane assembly lipoprotein YfiO n=2 Tax=Desulfovibrio RepID=D9YD47_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52734.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
outer membrane assembly lipoprotein YfiO
L1_008_000M1_scaffold_1978_23
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27878..28807)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Thioredoxin reductase n=2 Tax=Desulfovibrio RepID=D9YD46_9DELT
thioredoxin reductase
L1_008_000M1_scaffold_1978_24
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28804..29127)
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Desulfovibrio RepID=D9YD45_9DELT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
thioredoxin
L1_008_000M1_scaffold_1978_25
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29289..30371)
DNA (1083bp) protein (361aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Desulfovibrio RepID=D9YD44_9DELT
L1_008_000M1_scaffold_1978_26
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30397..31482)
DNA (1086bp) protein (362aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Fructose-1,6-bisphosphatase class 1 n=2 Tax=Desulfovibrio RepID=D9YD43_9DELT
fructose-1,6-bisphosphatase
L1_008_000M1_scaffold_1978_27
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31502..33001)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YD42_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52729.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
Displaying 27 items

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