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L1_008_000M1_scaffold_2111

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2111_1
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..240
DNA (240bp) protein (80aa)
Phage integrase family protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XPZ3_DESMR
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:BAH77693.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
L1_008_000M1_scaffold_2111_2
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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540..1907
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1URV6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51723.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
NLP/P60 protein
L1_008_000M1_scaffold_2111_3
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1904..3478
DNA (1575bp) protein (525aa)
Dephospho-CoA kinase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YCP7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51722.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
RluA family pseudouridine synthase
L1_008_000M1_scaffold_2111_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3635..4117)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCP6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51721.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
transcriptional regulator
L1_008_000M1_scaffold_2111_5
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4541..6592
DNA (2052bp) protein (684aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCP4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51720.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_2111_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6611..7105
DNA (495bp) protein (165aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Desulfovibrio RepID=D9YCP3_9DELT
ybaK/ebsC protein
L1_008_000M1_scaffold_2111_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7332..9419)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1URV1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51718.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor
L1_008_000M1_scaffold_2111_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9590..9856)
DNA (267bp) protein (89aa)
Transposase-like protein n=1 Tax=Escherichia coli MS 119-7 RepID=D8EC51_ECOLX
Transposase {ECO:0000313|EMBL:EZA32856.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
tnpA_2; transposase for IS200
L1_008_000M1_scaffold_2111_9
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10285..10473)
DNA (189bp) protein (63aa)
Rubredoxin n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YDX5_9DELT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
rubredoxin-type Fe(Cys)4 protein
L1_008_000M1_scaffold_2111_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10487..11020)
DNA (534bp) protein (178aa)
Bacterioferritin {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Bacterioferritin n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1URU7_9DELT
ferritin Dps family protein
L1_008_000M1_scaffold_2111_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11157..11564)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YDX7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51713.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Fur family ferric uptake regulator
L1_008_000M1_scaffold_2111_12
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11820..13151)
DNA (1332bp) protein (444aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1URU5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51712.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_2111_13
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13466..15088)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YDX9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51711.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
molybdopterin binding domain-containing protein
L1_008_000M1_scaffold_2111_14
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15163..16086)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YDY0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51710.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
quinol dehydrogenase membrane component
L1_008_000M1_scaffold_2111_15
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16083..16415)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1URU2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51709.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
4Fe-4S ferredoxin
Displaying 15 items

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